Acinetobacter (ID 297777) - BioProject

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Accession: PRJNA297777 ID: 297777

Acinetobacter

Acinetobacter whole-genome sequencing for hospital epidemology

See Genome Information for Acinetobacter baumannii

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2280 additional projects are related by organism.

Using WGS to track hospital outbreaks of Acinetobacter baumannii

Accession	PRJNA297777
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Acinetobacter[Taxonomy ID: 469] Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter
Publications	Fitzpatrick MA et al., "Influence of ACB complex genospecies on clinical outcomes in a U.S. hospital with high rates of multidrug resistance.", J Infect, 2015 Feb;70(2):144-52 Ozer EA et al., "Draft Genome Sequence of Acinetobacter baumannii Strain ABBL099, a Multidrug-Resistant Clinical Outbreak Isolate with a Novel Multilocus Sequence Type.", Genome Announc, 2014 Sep 11;2(5)
Grants	"Mechanistic Studies of Patatin-like ToxinsBacterial Predictors of Severe Nosocomial PneumoniaExoU and the Pathogenesis of Pseudomonas Pneumonia" (Grant ID R01 AI053674, National Institute of Allergy and Infectious Diseases) "Validating targets in p. aeruginosa type III secretion using chemical probes" (Grant ID R01 AI099269, National Institute of Allergy and Infectious Diseases) "Translational Research Training in Infectious Diseases" (Grant ID T32 AI095207, National Institute of Allergy and Infectious Diseases) "Pseudomonas aeruginosa Genomic Islands and Virulence" (Grant ID R01 AI075191, National Institute of Allergy and Infectious Diseases) "Mechanism of Azithromycin Activity in Pseudomonas Infections" (Grant ID R21 AI088286, National Institute of Allergy and Infectious Diseases) "Mediators of infection in the Pseudomonas aeruginosa accessory genome" (Grant ID MRSG-13-220-01 - MPC, American Cancer Society)
Submission	Registration date: 5-Oct-2015 Northwestern University Feinberg School of Medicine
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	60865
WGS master	165
SRA Experiments	165
Protein Sequences	608548
Publications
PubMed	2
PMC	2
Other datasets
BioSample	165
Assembly	165

Genome assemblies, organelles and plasmids:

Assembly GCA_000738845.1 :

Name	GenBank
Whole Genome Shotgun Assembly	JPDG00000000

Assembly GCA_001414565.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFA00000000

Assembly GCA_001414575.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFC00000000

Assembly GCA_001414585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEZ00000000

Assembly GCA_001414645.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFF00000000

Assembly GCA_001414655.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFG00000000

Assembly GCA_001414685.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFI00000000

Assembly GCA_001414705.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFJ00000000

Assembly GCA_001414725.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFK00000000

Assembly GCA_001414735.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFL00000000

Assembly GCA_001414765.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFM00000000

Assembly GCA_001414785.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFN00000000

Assembly GCA_001414805.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFO00000000

Assembly GCA_001414815.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFB00000000

Assembly GCA_001414835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFD00000000

Assembly GCA_001414865.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFH00000000

Assembly GCA_001414885.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFP00000000

Assembly GCA_001414905.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFR00000000

Assembly GCA_001414915.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFE00000000

Assembly GCA_001414925.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFQ00000000

Assembly GCA_001414935.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFS00000000

Assembly GCA_001414985.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFW00000000

Assembly GCA_001414995.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFT00000000

Assembly GCA_001415015.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFX00000000

Assembly GCA_001415025.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFY00000000

Assembly GCA_001415065.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGA00000000

Assembly GCA_001415085.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGB00000000

Assembly GCA_001415095.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGD00000000

Assembly GCA_001415105.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGE00000000

Assembly GCA_001415145.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGF00000000

Assembly GCA_001415165.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGG00000000

Assembly GCA_001415175.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGI00000000

Assembly GCA_001415185.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGH00000000

Assembly GCA_001415215.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGL00000000

Assembly GCA_001415245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGO00000000

Assembly GCA_001415255.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGP00000000

Assembly GCA_001415275.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGS00000000

Assembly GCA_001415295.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFU00000000

Assembly GCA_001415325.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFV00000000

Assembly GCA_001415345.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLFZ00000000

Assembly GCA_001415355.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGC00000000

Assembly GCA_001415385.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGJ00000000

Assembly GCA_001415395.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGK00000000

Assembly GCA_001415425.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGM00000000

Assembly GCA_001415435.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGN00000000

Assembly GCA_001415465.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGQ00000000

Assembly GCA_001415485.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGR00000000

Assembly GCA_001415505.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGT00000000

Assembly GCA_001415515.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGU00000000

Assembly GCA_001415535.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGW00000000

Assembly GCA_001415555.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGZ00000000

Assembly GCA_001415585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHD00000000

Assembly GCA_001415595.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHE00000000

Assembly GCA_001415615.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHG00000000

Assembly GCA_001415645.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHH00000000

Assembly GCA_001415665.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHI00000000

Assembly GCA_001415685.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHJ00000000

Assembly GCA_001415695.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHK00000000

Assembly GCA_001415715.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHL00000000

Assembly GCA_001415735.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHM00000000

Assembly GCA_001415765.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHN00000000

Assembly GCA_001415785.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHO00000000

Assembly GCA_001415805.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHP00000000

Assembly GCA_001415815.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHR00000000

Assembly GCA_001415835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHS00000000

Assembly GCA_001415865.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHW00000000

Assembly GCA_001415875.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHX00000000

Assembly GCA_001415895.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHY00000000

Assembly GCA_001415915.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGV00000000

Assembly GCA_001415935.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGX00000000

Assembly GCA_001415965.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLGY00000000

Assembly GCA_001415985.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHA00000000

Assembly GCA_001416005.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHB00000000

Assembly GCA_001416015.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHC00000000

Assembly GCA_001416035.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHF00000000

Assembly GCA_001416065.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHQ00000000

Assembly GCA_001416075.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHT00000000

Assembly GCA_001416095.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHU00000000

Assembly GCA_001416115.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHV00000000

Assembly GCA_001416145.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIB00000000

Assembly GCA_001416155.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIC00000000

Assembly GCA_001416165.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIE00000000

Assembly GCA_001416185.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIF00000000

Assembly GCA_001416225.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIG00000000

Assembly GCA_001416235.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIH00000000

Assembly GCA_001416255.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLII00000000

Assembly GCA_001416275.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIJ00000000

Assembly GCA_001416305.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIL00000000

Assembly GCA_001416315.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIN00000000

Assembly GCA_001416335.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIO00000000

Assembly GCA_001416355.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIQ00000000

Assembly GCA_001416385.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIV00000000

Assembly GCA_001416395.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIX00000000

Assembly GCA_001416415.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIZ00000000

Assembly GCA_001416425.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJB00000000

Assembly GCA_001416465.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJC00000000

Assembly GCA_001416475.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJE00000000

Assembly GCA_001416495.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJF00000000

Assembly GCA_001416515.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLHZ00000000

Assembly GCA_001416545.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIA00000000

Assembly GCA_001416555.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLID00000000

Assembly GCA_001416565.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIK00000000

Assembly GCA_001416585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIM00000000

Assembly GCA_001416625.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIP00000000

Assembly GCA_001416635.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIS00000000

Assembly GCA_001416655.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIT00000000

Assembly GCA_001416665.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIW00000000

Assembly GCA_001416705.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIY00000000

Assembly GCA_001416715.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJA00000000

Assembly GCA_001417485.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIU00000000

Assembly GCA_001417495.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJD00000000

Assembly GCA_001417515.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLJG00000000

Assembly GCA_001417545.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLIR00000000

Assembly GCA_001432375.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCJ00000000

Assembly GCA_001432385.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCM00000000

Assembly GCA_001432425.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCU00000000

Assembly GCA_001432435.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCV00000000

Assembly GCA_001432445.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCP00000000

Assembly GCA_001432455.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCR00000000

Assembly GCA_001432505.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCW00000000

Assembly GCA_001432525.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCX00000000

Assembly GCA_001432535.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDA00000000

Assembly GCA_001432545.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCY00000000

Assembly GCA_001432585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDC00000000

Assembly GCA_001432595.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDB00000000

Assembly GCA_001432625.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDD00000000

Assembly GCA_001432635.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDE00000000

Assembly GCA_001432665.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDF00000000

Assembly GCA_001432685.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCI00000000

Assembly GCA_001432705.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCK00000000

Assembly GCA_001432715.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCL00000000

Assembly GCA_001432745.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCN00000000

Assembly GCA_001432755.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCO00000000

Assembly GCA_001432775.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCQ00000000

Assembly GCA_001432785.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCS00000000

Assembly GCA_001432825.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCT00000000

Assembly GCA_001432835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLCZ00000000

Assembly GCA_001432845.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDG00000000

Assembly GCA_001432865.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDH00000000

Assembly GCA_001432895.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDJ00000000

Assembly GCA_001432925.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDK00000000

Assembly GCA_001432935.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDL00000000

Assembly GCA_001432965.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDP00000000

Assembly GCA_001432975.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDR00000000

Assembly GCA_001433005.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDS00000000

Assembly GCA_001433015.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDY00000000

Assembly GCA_001433045.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEC00000000

Assembly GCA_001433055.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEE00000000

Assembly GCA_001433075.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDI00000000

Assembly GCA_001433095.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDM00000000

Assembly GCA_001433125.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDN00000000

Assembly GCA_001433145.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDO00000000

Assembly GCA_001433155.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDQ00000000

Assembly GCA_001433185.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDW00000000

Assembly GCA_001433205.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDZ00000000

Assembly GCA_001433225.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEB00000000

Assembly GCA_001433245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLED00000000

Assembly GCA_001433265.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDV00000000

Assembly GCA_001433275.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDX00000000

Assembly GCA_001433295.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEA00000000

Assembly GCA_001433335.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEG00000000

Assembly GCA_001433355.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEF00000000

Assembly GCA_001433655.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDT00000000

Assembly GCA_001433675.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLDU00000000

Assembly GCA_001433695.1 :

Name	GenBank
Whole Genome Shotgun Assembly	LLEH00000000

SRA Data Details

Parameter	Value
Data volume, Gbases	258
Data volume, Tbytes	0.18

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Acinetobacter

Acinetobacter whole-genome sequencing for hospital epidemology

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