human gut metagenome (ID 277012) - BioProject

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Accession: PRJNA277012 ID: 277012

human gut metagenome

Draft bacterial assemblies from metagenomic sequencing of human stool samples

A collection of draft assemblies of single bacteria isolated in silico from metagenomic sequences of human stool samples.

Accession	PRJNA277012
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	human gut metagenome[Taxonomy ID: 408170] unclassified sequences; metagenomes; organismal metagenomes; human gut metagenome
Publications	Jeraldo P et al., "Draft genome sequences of 24 microbial strains assembled from direct sequencing from 4 stool samples.", Genome Announc, 2015 May 28;3(3)
Grants	"Microbial Metabolic Toxicity Drives Colon Cancer" (Grant ID R01 CA179243, NIH National Cancer Institute)
Submission	Registration date: 24-Apr-2015 - The Mayo Clinic - The Mayo Clinic
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6799
WGS master	26
Publications
PubMed	1
PMC	1
Other datasets
BioSample	30
Assembly	26

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

15
11
26

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_000980495.1	LARN00000000	SAMN03450005	N54.MGS-139	Acinetobacter sp. N54.MGS-139
GCA_000980515.1	LBCB00000000	SAMN03456685	UNK.MGS-1	Akkermansia sp. UNK.MGS-1
GCA_000980225.1	LARG00000000	SAMN03449999	N15.MGS-157	Alistipes sp. N15.MGS-157
GCA_000980475.1	LARM00000000	SAMN03450007	N54.MGS-20	Bacteroides sp. N54.MGS-20
GCA_000980575.1	LBCE00000000	SAMN03456681	UNK.MGS-13	Bacteroides sp. UNK.MGS-13
GCA_000980595.1	LBCF00000000	SAMN03456682	UNK.MGS-14	Bacteroides sp. UNK.MGS-14
GCA_000980335.1	LARC00000000	SAMN03449996	K4410.MGS-135	Burkholderia sp. K4410.MGS-135
GCA_000980215.1	LARH00000000	SAMN03450000	N15.MGS-207	Carnobacterium sp. N15.MGS-207
GCA_000980395.1	LARI00000000	SAMN03450001	N15.MGS-251	Carnobacterium sp. N15.MGS-251
GCA_000980325.1	LARA00000000	SAMN03449994	A254.MGS-251	Clostridium sp. A254.MGS-251
GCA_000980375.1	LARD00000000	SAMN03449997	K4410.MGS-306	Clostridium sp. K4410.MGS-306
GCA_000980555.1	LBCC00000000	SAMN03456689	UNK.MGS-6	Clostridium sp. UNK.MGS-6
GCA_000980675.1	LBCI00000000	SAMN03456686	UNK.MGS-25	Eubacterium sp. UNK.MGS-25
GCA_000980695.1	LBCJ00000000	SAMN03456687	UNK.MGS-26	Eubacterium sp. UNK.MGS-26
GCA_000980455.1	LARK00000000	SAMN03450003	N15.MGS-306	Heliobacterium sp. N15.MGS-306
GCA_000980425.1	LARJ00000000	SAMN03450002	N15.MGS-260	Lactobacillus sp. N15.MGS-260
GCA_000980505.1	LARO00000000	SAMN03450008	N54.MGS-719	Lactobacillus sp. N54.MGS-719
GCA_000980245.1	LARE00000000	SAMN03449998	N15.MGS-14	Odoribacter sp. N15.MGS-14
GCA_000980295.1	LARL00000000	SAMN03450006	N54.MGS-14	Odoribacter sp. N54.MGS-14
GCA_000980585.1	LBCD00000000	SAMN03456680	UNK.MGS-12	Odoribacter sp. UNK.MGS-12
GCA_000980655.1	LBCH00000000	SAMN03456684	UNK.MGS-17	Rhodospirillum sp. UNK.MGS-17
GCA_000980625.1	LBCG00000000	SAMN03456683	UNK.MGS-15	Roseburia sp. UNK.MGS-15
GCA_000980315.1	LAQZ00000000	SAMN03449993	A254.MGS-108	Ruminococcus sp. A254.MGS-108
GCA_000980235.1	LARB00000000	SAMN03449995	A254.MGS-254	Ruminococcus sp. A254.MGS-254
GCA_000980385.1	LARF00000000	SAMN03450004	N15.MGS-57	Ruminococcus sp. N15.MGS-57
GCA_000980705.1	LBCK00000000	SAMN03456688	UNK.MGS-30	Ruminococcus sp. UNK.MGS-30

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human gut metagenome

Draft bacterial assemblies from metagenomic sequencing of human stool samples

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