Bifidobacterium (ID 237576) - BioProject

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Accession: PRJNA237576 ID: 237576

Bifidobacterium

Bifidobacterium multi-species

See Genome Information for Bifidobacterium

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27 additional projects are related by organism.

Genomic characterization of the genus Bifidobacterium

Accession	PRJNA237576
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Bifidobacterium[Taxonomy ID: 1678] Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
Publications	Sun Z et al., "Comparative genomic analysis of 45 type strains of the genus Bifidobacterium: a snapshot of its genetic diversity and evolution.", PLoS One, 2015;10(2):e0117912
Submission	Registration date: 4-Nov-2014 Key Laboratory of Dairy BiotecInner Mongolia Agricultural University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3071
WGS master	41
SRA Experiments	41
Publications
PubMed	1
PMC	1
Other datasets
BioSample	41
Assembly	41

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

41
41

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_000771585.1	JDUR00000000	SAMN02442035	DSM 22766	Bifidobacterium actinocoloniiforme DSM 22766
GCA_000771705.1	JDUX00000000	SAMN02442044	JCM 15918	Bifidobacterium adolescentis JCM 15918
GCA_000771205.1	JDTY00000000	SAMN02442016	DSM 20098	Bifidobacterium angulatum DSM 20098 = JCM 7096
GCA_000771125.1	JDTU00000000	SAMN02442012	DSM 20089	Bifidobacterium asteroides DSM 20089
GCA_000771645.1	JDUU00000000	SAMN02442038	DSM 23969	Bifidobacterium biavatii DSM 23969
GCA_000771485.1	JDUM00000000	SAMN02442030	DSM 20456	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456
GCA_000771605.1	JDUS00000000	SAMN02442036	DSM 22767	Bifidobacterium bohemicum DSM 22767
GCA_000771085.1	JDTS00000000	SAMN02442010	DSM 19703	Bifidobacterium bombi DSM 19703
GCA_000771385.1	JDUH00000000	SAMN02442025	DSM 20432	Bifidobacterium boum DSM 20432
GCA_000771305.1	JDUD00000000	SAMN02442021	DSM 20213	Bifidobacterium breve DSM 20213 = JCM 1192
GCA_000771665.1	JDUV00000000	SAMN02442039	DSM 23973	Bifidobacterium callitrichos DSM 23973
GCA_000771545.1	JDUP00000000	SAMN02442033	DSM 21854	Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
GCA_000771025.1	JDTP00000000	SAMN02442007	DSM 16992	Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
GCA_000771425.1	JDUJ00000000	SAMN02442027	DSM 20434	Bifidobacterium choerinum DSM 20434
GCA_000771345.1	JDUF00000000	SAMN02442023	DSM 20216	Bifidobacterium coryneforme DSM 20216
GCA_000771465.1	JDUL00000000	SAMN02442028	DSM 20435	Bifidobacterium cuniculi DSM 20435
GCA_000771725.1	JDUY00000000	SAMN02442045	DSM 20436	Bifidobacterium dentium JCM 1195 = DSM 20436
GCA_000771165.1	JDTW00000000	SAMN02442014	DSM 20093	Bifidobacterium gallicum DSM 20093 = LMG 11596
GCA_000771325.1	JDUE00000000	SAMN02442022	DSM 20214	Bifidobacterium indicum LMG 11587 = DSM 20214
GCA_000771285.1	JDUC00000000	SAMN02442020	DSM 20211	Bifidobacterium longum subsp. suis DSM 20211
GCA_000771105.1	JDTT00000000	SAMN02442011	DSM 20088	Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088
GCA_000771365.1	JDUG00000000	SAMN02442024	DSM 20222	Bifidobacterium magnum DSM 20222
GCA_000770945.1	JDTL00000000	SAMN02442042	DSM 6492	Bifidobacterium merycicum DSM 6492
GCA_000771245.1	JDUA00000000	SAMN02442018	DSM 20102	Bifidobacterium minimum DSM 20102
GCA_000771525.1	JDUO00000000	SAMN02442032	DSM 21395	Bifidobacterium mongoliense DSM 21395
GCA_000771045.1	JDTQ00000000	SAMN02442008	DSM 17755	Bifidobacterium porcinum DSM 17755
GCA_000771445.1	JDUK00000000	SAMN02442029	DSM 20438	Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505
GCA_000771225.1	JDTZ00000000	SAMN02442017	DSM 20099	Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099
GCA_000771145.1	JDTV00000000	SAMN02442013	DSM 20092	Bifidobacterium pseudolongum subsp. globosum DSM 20092
GCA_000771565.1	JDUQ00000000	SAMN02442034	DSM 22366	Bifidobacterium psychraerophilum DSM 22366
GCA_000771505.1	JDUN00000000	SAMN02442031	DSM 20670	Bifidobacterium pullorum subsp. gallinarum DSM 20670
GCA_000771405.1	JDUI00000000	SAMN02442026	DSM 20433	Bifidobacterium pullorum DSM 20433
GCA_000770965.1	JDTM00000000	SAMN02442043	DSM 6531	Bifidobacterium pullorum subsp. saeculare DSM 6531 = LMG 14934
GCA_000771685.1	JDUW00000000	SAMN02442040	DSM 23975	Bifidobacterium reuteri DSM 23975
GCA_000770925.1	JDTK00000000	SAMN02442041	DSM 6489	Bifidobacterium ruminantium DSM 6489
GCA_000771625.1	JDUT00000000	SAMN02442037	DSM 23967	Bifidobacterium saguini DSM 23967
GCA_000770985.1	JDTN00000000	SAMN02442005	DSM 13734	Bifidobacterium scardovii JCM 12489 = DSM 13734
GCA_000771185.1	JDTX00000000	SAMN02442015	DSM 20096	Bifidobacterium subtile DSM 20096
GCA_000771005.1	JDTO00000000	SAMN02442006	DSM 15837	Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837
GCA_000771265.1	JDUB00000000	SAMN02442019	DSM 20210	Bifidobacterium thermophilum DSM 20210
GCA_000771065.1	JDTR00000000	SAMN02442009	DSM 17777	Bifidobacterium tsurumiense DSM 17777

SRA Data Details

Parameter	Value
Data volume, Gbases	32
Data volume, Mbytes	22183

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Bifidobacterium

Bifidobacterium multi-species

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