U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from Nucleotide

Accession: PRJNA244044 ID: 244044

soil metagenome

Uncultured Antibiotic Resistance Genes from Grassland and Agricultural Soil

Shotgun-cloned metagenomic libraries from 18 soils (9 grassland, 9 agricultural) were each expressed in E. More...
AccessionPRJNA244044
Data TypeMetagenome
ScopeEnvironment
Organismsoil metagenome[Taxonomy ID: 410658]
unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
PublicationsForsberg KJ et al., "Bacterial phylogeny structures soil resistomes across habitats.", Nature, 2014 May 29;509(7502):612-6
Grants
  • "BARD1 Regulation of Polyadenylation During Transcription-Coupled DNA Repair" (Grant ID DGE-1143954, National Science Foundation Graduate Research Fellowship Program)
  • "High-throughput Mammalian Cis-regulatory Analysis in vivo" (Grant ID DGE-1143954, National Science Foundation Graduate Research Fellowship Program)
  • "Functional metagenomic discovery of novel enzymatic functions from ultra low-volume samples with whole metagenome amplification" (Grant ID Synthetic Biology - SB2, National Academies Keck Futures Initiatives)
  • "Metagenomic engineering of probiotic bacteria to improve intestinal colonization dynamics and relative fitness The major goal of this project is to develop a novel platform technology for engineering fitness-enhancing properties into probiotic bacteria under direct in vivo selection in a mammalian host." (Grant ID DP2-DK-098089, NIH Director's New Innovator Award)
  • "A Synthetic Metagenomic Approach for Capturing Multigenic Biomass Conversion Machinery from Complex Microbial Communities" (Grant ID 2011-Dantas, International Center for Advanced Renewable Energy and Sustainability at Washington University)
  • "Functional Characterization of Antibiotic Resistance Reservoirs in Development Pediatric Microbiomes" (Grant ID MD-II-2011-117, Children's Discovery Institute)
SubmissionRegistration date: 8-Apr-2014
Washington University School of Medicine
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)4655
SRA Experiments219
Protein Sequences8882
Publications
PubMed1
PMC1
Other datasets
BioSample18
SRA Data Details
ParameterValue
Data volume, Gbases81
Data volume, Mbytes56484

Supplemental Content

Related information

LinkOut to external resources

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center