The aim of the project was to sequence, assemble and annotate QPX transcriptome in order to provide baseline information on the molecular basis of QPX virulence characteristics.
| Accession | PRJNA207819 |
| Data Type | Transcriptome or Gene expression |
| Scope | Monoisolate |
| Organism | Mucochytrium quahogii[Taxonomy ID: 96639] Eukaryota; Sar; Stramenopiles; Bigyra; Labyrinthulomycetes; Thraustochytrida; Thraustochytriaceae; Mucochytrium; Mucochytrium quahogii |
| Publications | Rubin E et al., "Characterization of the transcriptome and temperature-induced differential gene expression in QPX, the thraustochytrid parasite of hard clams.", BMC Genomics, 2014 Mar 28;15:245 |
| Submission | Registration date: 10-Jun-2013
Stony Brook University |
| Relevance | Aquaculture |
| Locus Tag Prefix | AKA41 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 15591 |
| TSA master | 1 |
| Transcript | 15590 |
| SRA Experiments | 1 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |