Borreliella burgdorferi (ID 223339) - BioProject

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Accession: PRJNA223339 ID: 223339

Borreliella burgdorferi (Lyme disease spirochete)

Borreliella burgdorferi Genome sequencing and assembly

See Genome Information for Borreliella burgdorferi

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68 additional projects are related by organism.

Aim1: characterize the degree of genetic isolation among the studied species. Aim2: investigate whether population genomic data contained information of epidemiological relevance.

Accession	PRJNA223339
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Borreliella burgdorferi[Taxonomy ID: 139] Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella burgdorferi
Grants	"GENE-COMBOS" (Grant ID P03006, French National Institute for Agricultural Research) "SIAGE_Pathogens" (Grant ID 32 831-2010, European Regional Development Found) "SIAGE_Pathogens" (Grant ID 939.92-65738/12730, Conseil Régional Auvergne (France))
Submission	Registration date: 3-Dec-2013 Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris - INRA
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	23747
WGS master	63
SRA Experiments	63
Other datasets
BioSample	63
Assembly	63

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

63
63

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_000502195.1	AYCI00000000	SAMN02378852	IPT138	Borreliella afzelii IPT138
GCA_000502175.1	AYCH00000000	SAMN02378851	IPT110	Borreliella afzelii IPT110
GCA_000501575.1	AYCJ00000000	SAMN02378853	IPT142	Borreliella afzelii IPT142
GCA_000501555.1	AYCG00000000	SAMN02378850	IPT109	Borreliella afzelii IPT109
GCA_000501535.1	AYCE00000000	SAMN02378848	IPT137	Borreliella burgdorferi IPT137
GCA_000501515.1	AYBV00000000	SAMN02378839	IPT70	Borreliella burgdorferi IPT70
GCA_000501495.1	AYBU00000000	SAMN02378838	IPT69	Borreliella burgdorferi IPT69
GCA_000501475.1	AYBT00000000	SAMN02378837	IPT61	Borreliella burgdorferi IPT61
GCA_000501455.1	AYBR00000000	SAMN02378835	IPT51	Borreliella burgdorferi IPT51
GCA_000501435.1	AYBQ00000000	SAMN02378834	IPT49	Borreliella burgdorferi IPT49
GCA_000501415.1	AYBP00000000	SAMN02378833	IPT48	Borreliella burgdorferi IPT48
GCA_000501395.1	AYBO00000000	SAMN02378832	IPT46	Borreliella burgdorferi IPT46
GCA_000501375.1	AYBN00000000	SAMN02378831	IPT35	Borreliella burgdorferi IPT35
GCA_000501355.1	AYBM00000000	SAMN02378830	IPT27	Borreliella burgdorferi IPT27
GCA_000501335.1	AYBL00000000	SAMN02378829	IPT26	Borreliella burgdorferi IPT26
GCA_000501315.1	AYBJ00000000	SAMN02378827	IPT23	Borreliella burgdorferi IPT23
GCA_000501295.1	AYBI00000000	SAMN02378826	IPT2	Borreliella burgdorferi IPT2
GCA_000502155.1	AYCF00000000	SAMN02378849	IPT141	Borreliella burgdorferi IPT141
GCA_000502135.1	AYCD00000000	SAMN02378847	IPT132	Borreliella burgdorferi IPT132
GCA_000502115.1	AYCC00000000	SAMN02378846	IPT125	Borreliella burgdorferi IPT125
GCA_000502095.1	AYCB00000000	SAMN02378845	IPT112	Borreliella burgdorferi IPT112
GCA_000502075.1	AYCA00000000	SAMN02378844	IPT93	Borreliella burgdorferi IPT93
GCA_000502055.1	AYBZ00000000	SAMN02378843	IPT92	Borreliella burgdorferi IPT92
GCA_000502035.1	AYBY00000000	SAMN02378842	IPT87	Borreliella burgdorferi IPT87
GCA_000502015.1	AYBX00000000	SAMN02378841	IPT77	Borreliella burgdorferi IPT77
GCA_000501995.1	AYBW00000000	SAMN02378840	IPT71	Borreliella burgdorferi IPT71
GCA_000501975.1	AYBS00000000	SAMN02378836	IPT60	Borreliella burgdorferi IPT60
GCA_000501955.1	AYBK00000000	SAMN02378828	IPT24	Borreliella burgdorferi IPT24
GCA_000501935.1	AYBH00000000	SAMN02378825	IPT19	Borreliella burgdorferi IPT19
GCA_000501915.1	AYBF00000000	SAMN02378823	IPT139	Borreliella garinii IPT139
GCA_000501895.1	AYBA00000000	SAMN02378818	IPT130	Borreliella garinii IPT130
GCA_000501875.1	AYAZ00000000	SAMN02378817	IPT129	Borreliella garinii IPT129
GCA_000501855.1	AYAY00000000	SAMN02378816	IPT128	Borreliella garinii IPT128
GCA_000501835.1	AYAX00000000	SAMN02378815	IPT126	Borreliella garinii IPT126
GCA_000501815.1	AYAV00000000	SAMN02378813	IPT120	Borreliella garinii IPT120
GCA_000501795.1	AYAU00000000	SAMN02378812	IPT117	Borreliella garinii IPT117
GCA_000501775.1	AYAS00000000	SAMN02378810	IPT114	Borreliella garinii IPT114
GCA_000501755.1	AYAR00000000	SAMN02378809	IPT113	Borreliella garinii IPT113
GCA_000501735.1	AYAQ00000000	SAMN02378808	IPT108	Borreliella garinii IPT108
GCA_000501715.1	AYAP00000000	SAMN02378807	IPT107	Borreliella garinii IPT107
GCA_000501695.1	AYAO00000000	SAMN02378806	IPT105	Borreliella garinii IPT105
GCA_000501675.1	AYAE00000000	SAMN02378796	IPT89	Borreliella garinii IPT89
GCA_000501655.1	AYAD00000000	SAMN02378795	IPT88	Borreliella garinii IPT88
GCA_000501635.1	AYAC00000000	SAMN02378794	IPT86	Borreliella garinii IPT86
GCA_000501615.1	AYAB00000000	SAMN02378793	IPT76	Borreliella garinii IPT76
GCA_000501595.1	AYAA00000000	SAMN02378792	IPT75	Borreliella garinii IPT75
GCA_000501275.1	AYBG00000000	SAMN02378824	IPT140	Borreliella garinii IPT140
GCA_000501255.1	AYBE00000000	SAMN02378822	IPT136	Borreliella garinii IPT136
GCA_000501235.1	AYBD00000000	SAMN02378821	IPT134	Borreliella garinii IPT134
GCA_000501215.1	AYBC00000000	SAMN02378820	IPT133	Borreliella garinii IPT133
GCA_000501195.1	AYBB00000000	SAMN02378819	IPT131	Borreliella garinii IPT131
GCA_000501175.1	AYAW00000000	SAMN02378814	IPT124	Borreliella garinii IPT124
GCA_000501155.1	AYAT00000000	SAMN02378811	IPT115	Borreliella garinii IPT115
GCA_000501135.1	AYAN00000000	SAMN02378805	IPT104	Borreliella garinii IPT104
GCA_000501115.1	AYAM00000000	SAMN02378804	IPT101	Borreliella garinii IPT101
GCA_000501095.1	AYAL00000000	SAMN02378803	IPT99	Borreliella garinii IPT99
GCA_000501075.1	AYAK00000000	SAMN02378802	IPT98	Borreliella garinii IPT98
GCA_000501055.1	AYAJ00000000	SAMN02378801	IPT96	Borreliella garinii IPT96
GCA_000501035.1	AYAI00000000	SAMN02378800	IPT95	Borreliella garinii IPT95
GCA_000501015.1	AYAH00000000	SAMN02378799	IPT94	Borreliella garinii IPT94
GCA_000500995.1	AYAG00000000	SAMN02378798	IPT91	Borreliella garinii IPT91
GCA_000500975.1	AYAF00000000	SAMN02378797	IPT90	Borreliella garinii IPT90
GCA_000500955.1	AXZW00000000	SAMN02378791	IPT74	Borreliella garinii IPT74

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	483

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Borreliella burgdorferi (Lyme disease spirochete)

Borreliella burgdorferi Genome sequencing and assembly

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