Bacteroidetes oral taxon 274 str. F0058 (ID 41957) - BioProject

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Accession: PRJNA41957 ID: 41957

Bacteroidetes oral taxon 274 str. F0058

Reference genome for Human Microbiome Project

See Genome Information for Bacteroidetes oral taxon 274

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

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2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

Bacteroidetes oral taxon 274 str. F0058. This genome will be used for comparative analysis.

Accession	PRJNA41957
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Bacteroidetes oral taxon 274 str. F0058[Taxonomy ID: 575590] Bacteria; Bacteroidota; Bacteroidetes oral taxon 274; Bacteroidetes oral taxon 274 str. F0058
Submission	Registration date: 28-Apr-2010 Broad Institute - Broad Institute
Locus Tag Prefix	HMPREF0156

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	39
WGS master	1
SRA Experiments	2
Protein Sequences	1856
Other datasets
BioSample	3
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_000163695.1	Scaffold	ADCM00000000	SAMN02463821	Bacteroidetes oral taxon 274 str. F0058

SRA Data Details

Parameter	Value
Data volume, Mbases	106
Data volume, Mbytes	221

Supplemental Content

LinkOut to external resources

GOLD: Gp0004002 [Genomes On Line Database]
GOLD: Gp0004002
Genomes On Line Database
648861005: Bacteroidetes oral taxon 274 F0058 [Integrated Microbial Genomes]
648861005: Bacteroidetes oral taxon 274 F0058
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Bacteroidetes oral taxon 274 str. F0058
Bacteroidetes oral taxon 274 str. F0058
Reference genome for Human Microbiome Project

BioProject
BioProject Links for Nucleotide (Select 298274281) (1)
BioProject
Concise Conserved Domain Links for Protein (Select 490419197) (1)
Conserved Domains
Bacteroidetes oral taxon 274 str. F0058, whole genome shotgun sequencing project
Bacteroidetes oral taxon 274 str. F0058, whole genome shotgun sequencing project
gi|295346254|gb|ADCM00000000.1|ADCM 000

Nucleotide
PREDICTED: Homo sapiens dpy-19 like 4 (DPY19L4), transcript variant X7, mRNA
PREDICTED: Homo sapiens dpy-19 like 4 (DPY19L4), transcript variant X7, mRNA
gi|2217371769|ref|XM_047421715.1|

Nucleotide

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