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Accession: PRJNA637995 ID: 637995

Papua New Guinea birds

Papua New Guinea birds Genome sequencing and assembly

Denovo genome Sequencing of 15 species of Papua New Guinea birds

Accession	PRJNA637995
Data Type	Genome sequencing
Scope	Multispecies
Publications	Pujolar JM et al., "The formation of avian montane diversity across barriers and along elevational gradients.", Nat Commun, 2022 Jan 12;13(1):268
Submission	Registration date: 8-Jun-2020 University of Copenhagen
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	15
SRA Experiments	15
Publications
PubMed	1
PMC	1
Other datasets
BioSample	15
Assembly	15

Assembly details:

Assembly level

Number of Assemblies

Scaffold

15
15

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_040366095.1		JABYRD000000000	SAMN15163757	AHR1	Ceyx lepidus
GCA_040366035.1		JABYRH000000000	SAMN15163761	PHF4	Ficedula hyperythra
GCA_040366015.1		JABYRK000000000	SAMN15163764	TEO2	Ifrita kowaldi
GCA_040366055.1		JABYRG000000000	SAMN15163760	JBK2	Melanocharis versteri
GCA_040365975.1		JABYRJ000000000	SAMN15163763	KAJ1	Melilestes megarhynchus
GCA_040366235.1		JABYQW000000000	SAMN15163750	KAJ2	Melipotes ater
GCA_040366195.1		JABYQZ000000000	SAMN15163753	KAJ1	Origma robusta
GCA_040366215.1		JABYQX000000000	SAMN15163751	TEO19	Pachycephala schlegelii
GCA_040366115.1		JABYRF000000000	SAMN15163759	KAJ1	Paramythia montium
GCA_040366155.1		JABYRA000000000	SAMN15163754	TEO6	Peneothello sigillata
GCA_040366175.1		JABYRB000000000	SAMN15163755	KAJ2	Ptiloprora guisei
GCA_040366135.1		JABYRC000000000	SAMN15163756	JDK1	Rhipidura albolimbata
GCA_040366255.1		JABYQY000000000	SAMN15163752	TEO22	Sericornis nouhuysi
GCA_040366075.1		JABYRE000000000	SAMN15163758	PHF2	Thapsinillas affinis
GCA_040365995.1		JABYRI000000000	SAMN15163762	PZM4	Toxorhamphus novaeguineae

SRA Data Details

Parameter	Value
Data volume, Gbases	1,006
Data volume, Tbytes	0.45

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Nucleotide
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PubMed
PubMed Links
SRA
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WGS master
Link to WGS master record(s)

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BioProject Links for Nucleotide (Select 2750927747) (1)
BioProject
Papua New Guinea birds
Papua New Guinea birds
Papua New Guinea birds Genome sequencing and assembly

BioProject
Assembly for Nucleotide (Select 2750927743) (1)
Assembly
cytochrome c oxidase subunit I, partial (mitochondrion) [Panopeus lacustris]
cytochrome c oxidase subunit I, partial (mitochondrion) [Panopeus lacustris]
gi|1934896929|gb|QPF69227.1|

Protein
Panopeus lacustris voucher ULLZ 3818 histone H3 (H3) gene, partial cds
Panopeus lacustris voucher ULLZ 3818 histone H3 (H3) gene, partial cds
gi|575496841|gb|KF682548.1|

Nucleotide

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