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Accession: PRJNA991952 ID: 991952

Genome sequencing of miscellaneous Xanthomonas campestris from WHRI collection

Xanthomonas campestris is a Gram-negative bacterial species that encompasses numerous pathovars, each capable of causing disease in different plant species. More...
AccessionPRJNA991952
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "Xanthomonas plant diseases: mitigating existing, emerging and future threats to UK agriculture" (Grant ID BB/T010916/1, UK Research and Innovation)
SubmissionRegistration date: 6-Jul-2023
University of Exeter
Related Resources
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)62
WGS master58
Genomic DNA4
SRA Experiments66
Protein Sequences12419
Other datasets
BioSample62
Assembly61
Assembly details:
Assembly levelNumber of Assemblies
3
43
15
61
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_040195375.1ScaffoldJBEFVP000000000
SAMN39908765
WHRI 10066A
GCA_040195355.1ScaffoldJBEFVQ000000000
SAMN39908766
WHRI 10066B
GCA_040195335.1ScaffoldJBEFVV000000000
SAMN39908771
WHRI 10069A
GCA_040195315.1ScaffoldJBEFVR000000000
SAMN39908767
WHRI 10067A
GCA_040195295.1ScaffoldJBEFVT000000000
SAMN39908769
WHRI 10068A
GCA_040195275.1ScaffoldJBEFVY000000000
SAMN39908774
WHRI 10219C
GCA_040195245.1ScaffoldJBEFVW000000000
SAMN39908772
WHRI 10069B
GCA_040195235.1ScaffoldJBEFVU000000000
SAMN39908770
WHRI 10068B
GCA_040195215.1ScaffoldJBEFWC000000000
SAMN40354515
WHRI 10224
GCA_040195195.1ScaffoldJBEFVZ000000000
SAMN39908775
WHRI 10219D
GCA_040195175.1ScaffoldJBEFWB000000000
SAMN40354517
WHRI 10223
GCA_040195155.1ScaffoldJBEFVS000000000
SAMN39908768
WHRI 10067B
GCA_040195135.1ScaffoldJBEFVX000000000
SAMN39908773
WHRI 10219A
GCA_040195115.1ScaffoldJBEFWG000000000
SAMN39908753
WHRI 10228
GCA_040195095.1ScaffoldJBEFWE000000000
SAMN39908751
WHRI 10226
GCA_040195075.1ScaffoldJBEFWA000000000
SAMN39908750
WHRI 10221
GCA_040195055.1ScaffoldJBEFWH000000000
SAMN39908754
WHRI 10229
GCA_040195035.1ScaffoldJBEFWI000000000
SAMN39908755
WHRI 10230
GCA_040195015.1ScaffoldJBEFWD000000000
SAMN40354516
WHRI 10225
GCA_040194995.1ScaffoldJBEFWM000000000
SAMN39908779
WHRI 10244A
GCA_040194975.1ScaffoldJBEFWN000000000
SAMN39908780
WHRI 10245
GCA_040194955.1ScaffoldJBEFWO000000000
SAMN39908756
WHRI 10246
GCA_040194935.1ScaffoldJBEFWJ000000000
SAMN39908776
WHRI 10231A
GCA_040194915.1ScaffoldJBEFWP000000000
SAMN39908757
WHRI 10247
GCA_040194895.1ScaffoldJBEFWT000000000
SAMN39908781
WHRI 10251A
GCA_040194855.1ScaffoldJBEFWY000000000
SAMN39908763
WHRI 10256
GCA_040194875.1ScaffoldJBEFWS000000000
SAMN39908760
WHRI 10250
GCA_040194815.1ScaffoldJBEFWR000000000
SAMN39908759
WHRI 10249
GCA_040194775.1ScaffoldJBEFWU000000000
SAMN39908761
WHRI 10252
GCA_040194795.1ScaffoldJBEFWZ000000000
SAMN39908784
WHRI 10257A
GCA_040194745.1ScaffoldJBEFWK000000000
SAMN39908777
WHRI 10231B
GCA_040194735.1ScaffoldJBEFWW000000000
SAMN39908762
WHRI 10254
GCA_040194715.1ScaffoldJBEFXA000000000
SAMN39908764
WHRI 10258
GCA_040194695.1ScaffoldJBEFXD000000000
SAMN39908787
WHRI 3875A
GCA_040194675.1ScaffoldJBEFWQ000000000
SAMN39908758
WHRI 10248
GCA_040194655.1ScaffoldJBEFWF000000000
SAMN39908752
WHRI 10227
GCA_040194635.1ScaffoldJBEFXB000000000
SAMN39908785
WHRI 2243A
GCA_040194595.1ScaffoldJBEFWL000000000
SAMN39908778
WHRI 10231C
GCA_040194575.1ScaffoldJBEFWV000000000
SAMN39908782
WHRI 10253
GCA_040194555.1ScaffoldJBEFXF000000000
SAMN39908789
WHRI 3963
GCA_040194515.1ScaffoldJBEFXC000000000
SAMN39908786
WHRI 2309A
GCA_040194495.1ScaffoldJBEFXH000000000
SAMN40354518
WHRI 8482
GCA_040194475.1ScaffoldJBEFXI000000000
SAMN40354519
WHRI 8835
GCA_040194535.2Complete genomeSAMN40354514
WHRI 8093
GCA_040194615.2Complete genomeSAMN39908788
WHRI 3892A
GCA_040194835.2Complete genomeSAMN39908783
WHRI 10255
GCA_041520835.1ContigJBGOFX000000000
SAMN43286084
WHRI 10265
GCA_041520805.1ContigJBGOFV000000000
SAMN43286086
WHRI 10268
GCA_041520775.1ContigJBGOFW000000000
SAMN43286085
WHRI 10266
GCA_035012765.1ContigJAYGQI000000000
SAMN36318664
WHRI 6508
GCA_035011085.1ContigJAYGQG000000000
SAMN36318661
WHRI 6505
GCA_035011065.1ContigJAYGQH000000000
SAMN36318663
WHRI 6507
GCA_035011045.1ContigJAYGQF000000000
SAMN36318660
WHRI 6504
GCA_035011025.1ContigJAYGQJ000000000
SAMN36318665
WHRI 8306
GCA_035012945.1ContigJAYGQC000000000
SAMN36318668
WHRI 8864
GCA_035012925.1ContigJAYGQD000000000
SAMN36318669
WHRI 8865
GCA_035012905.1ContigJAYGQB000000000
SAMN36318667
WHRI 8951
GCA_035012885.1ContigJAYGQK000000000
SAMN36318666
WHRI 3965
GCA_035012865.1ContigJAYGQE000000000
SAMN36318659
WHRI 6503
GCA_035012845.1ContigJAYGPZ000000000
SAMN36318657
WHRI 8918A
GCA_035012825.1ContigJAYGQA000000000
SAMN36318658
WHRI 6495
SRA Data Details
ParameterValue
Data volume, Gbases64
Data volume, Mbytes27658

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