Trichomycterus rosablanca isolate:fTriRos1 (ID 1074370) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Nucleotide

Accession: PRJNA1074370 ID: 1074370

Trichomycterus rosablanca isolate:fTriRos1

Trichomycterus rosablanca isolate:fTriRos1 RefSeq Genome sequencing and assembly

See Genome Information for Trichomycterus rosablanca

Navigate Up

This project is a component of the Trichomycterus rosablanca (Rosablanca cavefish) genome, fTriRos1

Navigate Across

2 additional projects are related by organism.

2 additional projects are components of the Trichomycterus rosablanca (Rosablanca cavefish) genome, fTriRos1.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA924296). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA1074370
Data Type	RefSeq Genome sequencing and assembly
Scope	Monoisolate
Organism	Trichomycterus rosablanca[Taxonomy ID: 2290929] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus; Trichomycterus rosablanca
Publications	Rhie A et al., "Towards complete and error-free genome assemblies of all vertebrate species.", Nature, 2021 Apr;592(7856):737-746
Submission	Registration date: 15-May-2023 Vertebrate Genomes Project - G10K - Rockefeller Vertebrate Genome Lab
Related Resources	Daniel Cadena
Relevance	Reference genome
Locus Tag Prefix	V4T02

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	43257
Transcript	42881
Protein Sequences	34453
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

Download

Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_030014385.1	Chromosome	JASDDV000000000	27	SAMN32755940	Trichomycterus rosablanca

Related GenBank Project

PRJNA924296 : Trichomycterus rosablanca (Rosablanca cavefish) genome, fTriRos1, haplotype 1

Supplemental Content

Related information

Assembly
All related Assemblies
BioProject
Links from project to related projects
BioSample
All related BioSamples
Full text in PMC
PMC links
Genome
Related Genomes
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
PubMed
PubMed Links
Related Genes
Genes related to a genome project
Taxonomy
Taxonomy Links
Transcript
Link to transcript records
Umbrella projects
All Umbrella projects

Related Resources

Daniel Cadena
Daniel Cadena

Recent activity

Clear Turn Off Turn On

Trichomycterus rosablanca isolate:fTriRos1
Trichomycterus rosablanca isolate:fTriRos1
Trichomycterus rosablanca isolate:fTriRos1 RefSeq Genome sequencing and assembly

BioProject
BioProject Links for Nucleotide (Select 2671665624) (1)
BioProject
Bifidobacterium animalis subsp. animalis MCC 0483 M0483_025, whole genome shotgu...
Bifidobacterium animalis subsp. animalis MCC 0483 M0483_025, whole genome shotgun sequence
gi|914376523|gb|AWFK01000025.1||gnl AWFK01|M0483_025

Nucleotide
Taxonomy Links for Nucleotide (Select 2726612194) (1)
Taxonomy
686 (synonym: hlcc3)
686 (synonym: hlcc3)

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

BioProject

Result Filters