U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from Nucleotide

Accession: PRJNA80805 ID: 80805

sediment metagenome

sediment metagenome Genome sequencing and assembly

See Genome Information for Dehalobacter
The sequencing of a chloroform-dechlorinating culture derived from an enrichment culture.
AccessionPRJNA80805
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsediment metagenome[Taxonomy ID: 749907]
unclassified sequences; metagenomes; ecological metagenomes; sediment metagenome
PublicationsTang S et al., "Semi-automatic in silico gap closure enabled de novo assembly of two Dehalobacter genomes from metagenomic data.", PLoS One, 2012;7(12):e52038
Grants
  • "BioReD: Biomarkers and Tools for Reductive Dechlorination Site Assessment, Monitoring, and Management" (Grant ID W912HQ-07-C-0036/ER-1586, United States Department of Defense-Strategic Environmental Research and Development Program)
  • "BEEM: Bioproducts and Enzymes from Environmental Metagenomes" (Grant ID GL2-01-004, Government of Ontario-Ministry of Research and Innovation)
  • "BEEM: Bioproducts and Enzymes from Environmental Metagenomes" (Grant ID 2009-OGI-ABC-1405, Genome Canada and Ontario Genomics Institute)
SubmissionRegistration date: 16-Oct-2012
- University of Toronto
- Joint Genome Institute
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2
WGS master1
Genomic DNA1
SRA Experiments6
Protein Sequences2980
Publications
PubMed1
PMC1
Other datasets
BioSample4
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases40
Data volume, Mbytes14487

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center