Bacteroides fragilis (ID 943125) - BioProject

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Accession: PRJNA943125 ID: 943125

Bacteroides fragilis

Bacteroides fragilis Genome sequencing and assembly

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Whole genome sequencing of multi drug resistant clinical Dutch Bacteroides fragilis isolates, followed by a hybrid assembly, to study the presence of antimicrobial resistance genes and mobile genetic elements.

Accession	PRJNA943125
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Bacteroides fragilis[Taxonomy ID: 817] Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fragilis
Publications	Boiten KE et al., "Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands.", Anaerobe, 2023 Jun;81:102722
Submission	Registration date: 30-May-2023 University Medical Center Groningen
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10
WGS master	3
Genomic DNA	7
Protein Sequences	8646
Publications
PubMed	1
Other datasets
BioSample	5
Assembly	5

Assembly details:

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Assembly level

Number of Assemblies

2
1
2
5

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_030131745.1	JARIXL000000000		SAMN33709311	MDR_R03	Bacteroides fragilis
GCA_030131735.1	JARIXK000000000		SAMN33709310	MDR_E02	Bacteroides fragilis
GCA_030131725.1	JARIXM000000000		SAMN33709313	MDR_H05	Bacteroides fragilis
GCA_040142595.1		4	SAMN33709052	MDR_L04	Bacteroides fragilis
GCA_040142445.1		3	SAMN33708995	MDR_U01	Bacteroides fragilis

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Bacteroides fragilis

Bacteroides fragilis Genome sequencing and assembly

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