marine metagenome (ID 894514) - BioProject

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Accession: PRJNA894514 ID: 894514

marine metagenome

Western Antarctic Peninsula Metagenomes Metagenome

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This project is a component of the Palmer LTER sequence data

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3 additional projects are components of the Palmer LTER sequence data.

Raw metagenomic sequence reads and MAGs from the coastal west Antarctic Peninsula.

Accession	PRJNA894514
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Submission	Registration date: 27-Nov-2022 - Palmer LTER - Bowman Lab
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	137
SRA Experiments	48
Other datasets
BioSample	185
Assembly	137

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

137
137

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_028823445.1	JAPKBH000000000	SAMN31464252	ANT-33	Acidimicrobiales bacterium
GCA_028823135.1	JAPKCB000000000	SAMN31464272	ANT-53	Acidimicrobiales bacterium
GCA_028823015.1	JAPKCJ000000000	SAMN31464280	ANT-61	Acidimicrobiales bacterium
GCA_028822835.1	JAPKCT000000000	SAMN31464290	ANT-71	Acidimicrobiales bacterium
GCA_028822755.1	JAPKCV000000000	SAMN31464292	ANT-73	Acidimicrobiales bacterium
GCA_028822535.1	JAPKDO000000000	SAMN31464311	ANT-92	Acidimicrobiales bacterium
GCA_028822075.1	JAPKEM000000000	SAMN31464335	ANT-116	Acidimicrobiales bacterium
GCA_028822735.1	JAPKCY000000000	SAMN31464295	ANT-76	Akkermansiaceae bacterium
GCA_028822695.1	JAPKDA000000000	SAMN31464297	ANT-78	Akkermansiaceae bacterium
GCA_028822935.1	JAPKCM000000000	SAMN31464283	ANT-64	Akkermansiaceae bacterium
GCA_026421245.1	JAPKDJ000000000	SAMN31464306	ANT-87	Akkermansiaceae bacterium
GCA_028824965.1	JAPKBD000000000	SAMN31464248	ANT-29	Alphaproteobacteria bacterium
GCA_028822585.1	JAPKDL000000000	SAMN31464308	ANT-89	Alphaproteobacteria bacterium
GCA_028822575.1	JAPKDN000000000	SAMN31464310	ANT-91	Alphaproteobacteria bacterium
GCA_028822405.1	JAPKDU000000000	SAMN31464317	ANT-98	Alphaproteobacteria bacterium
GCA_028822385.1	JAPKDV000000000	SAMN31464318	ANT-99	Alphaproteobacteria bacterium
GCA_028821995.1	JAPKEQ000000000	SAMN31464339	ANT-120	Alphaproteobacteria bacterium
GCA_028821955.1	JAPKEU000000000	SAMN31464343	ANT-124	Alphaproteobacteria bacterium
GCA_026421105.1	JAPKDI000000000	SAMN31464305	ANT-86	Alphaproteobacteria bacterium
GCA_028822305.1	JAPKDZ000000000	SAMN31464322	ANT-103	Amylibacter sp.
GCA_028822985.1	JAPKCK000000000	SAMN31464281	ANT-62	Aquiluna sp.
GCA_028823335.1	JAPKBQ000000000	SAMN31464261	ANT-42	Arenicellales bacterium
GCA_028825345.1	JAPKAJ000000000	SAMN31464228	ANT-9	Arenicellales bacterium
GCA_028825305.1	JAPKAL000000000	SAMN31464230	ANT-11	Arenicellales bacterium
GCA_028825475.1	JAPKAB000000000	SAMN31464220	ANT-1	Ascidiaceihabitans sp.
GCA_028823315.1	JAPKBS000000000	SAMN31464263	ANT-44	Aurantimonas coralicida
GCA_026421285.1	JAPKAH000000000	SAMN31464226	ANT-7	Beijerinckiaceae bacterium
GCA_028825255.1	JAPKAN000000000	SAMN31464232	ANT-13	Candidatus Latescibacterota bacterium
GCA_028825115.1	JAPKAV000000000	SAMN31464240	ANT-21	Candidatus Nanopelagicales bacterium
GCA_028825085.1	JAPKAZ000000000	SAMN31464244	ANT-25	Candidatus Nanopelagicales bacterium
GCA_028821705.1	JAPKFE000000000	SAMN31464353	ANT-134	Candidatus Neomarinimicrobiota bacterium
GCA_028822955.1	JAPKCL000000000	SAMN31464282	ANT-63	Candidatus Poseidoniaceae archaeon
GCA_028822845.1	JAPKCS000000000	SAMN31464289	ANT-70	Candidatus Poseidoniaceae archaeon
GCA_028821785.1	JAPKFC000000000	SAMN31464351	ANT-132	Candidatus Poseidoniaceae archaeon
GCA_028821815.1	JAPKEY000000000	SAMN31464347	ANT-128	Candidatus Poseidoniales archaeon
GCA_028821875.1	JAPKEW000000000	SAMN31464345	ANT-126	Candidatus Poseidoniales archaeon
GCA_028823355.1	JAPKBP000000000	SAMN31464260	ANT-41	Candidatus Poseidoniales archaeon
GCA_028821675.1	JAPKFG000000000	SAMN31464355	ANT-136	Candidatus Poseidoniales archaeon
GCA_028825195.1	JAPKAR000000000	SAMN31464236	ANT-17	Candidatus Poseidoniales archaeon
GCA_028822055.1	JAPKEO000000000	SAMN31464337	ANT-118	Candidatus Poseidoniia archaeon
GCA_028824945.1	JAPKBB000000000	SAMN31464246	ANT-27	Candidatus Thioglobus sp.
GCA_028821715.1	JAPKFF000000000	SAMN31464354	ANT-135	Dehalococcoidia bacterium
GCA_028821895.1	JAPKEX000000000	SAMN31464346	ANT-127	Dehalococcoidia bacterium
GCA_028822675.1	JAPKDE000000000	SAMN31464301	ANT-82	Dehalococcoidia bacterium
GCA_026421215.1	JAPKBN000000000	SAMN31464258	ANT-39	Dehalococcoidia bacterium
GCA_026421185.1	JAPKCH000000000	SAMN31464278	ANT-59	Dehalococcoidia bacterium
GCA_028821825.1	JAPKFA000000000	SAMN31464349	ANT-130	Dokdonia donghaensis
GCA_028823265.1	JAPKBU000000000	SAMN31464265	ANT-46	Erythrobacter sp.
GCA_028825365.1	JAPKAF000000000	SAMN31464224	ANT-5	Flavobacteriaceae bacterium
GCA_028825055.1	JAPKAW000000000	SAMN31464241	ANT-22	Flavobacteriales bacterium
GCA_028823435.1	JAPKBK000000000	SAMN31464255	ANT-36	Flavobacteriales bacterium
GCA_028823145.1	JAPKCA000000000	SAMN31464271	ANT-52	Flavobacteriales bacterium
GCA_028821915.1	JAPKET000000000	SAMN31464342	ANT-123	Flavobacteriales bacterium
GCA_028821935.1	JAPKEV000000000	SAMN31464344	ANT-125	Gammaproteobacteria bacterium
GCA_028825335.1	JAPKAI000000000	SAMN31464227	ANT-8	Gammaproteobacteria bacterium
GCA_028825045.1	JAPKAY000000000	SAMN31464243	ANT-24	Halioglobus sp.
GCA_028823475.1	JAPKBI000000000	SAMN31464253	ANT-34	Halioglobus sp.
GCA_028822745.1	JAPKCZ000000000	SAMN31464296	ANT-77	Kiritimatiellia bacterium
GCA_026421165.1	JAPKCQ000000000	SAMN31464287	ANT-68	Lewinella sp.
GCA_028822645.1	JAPKDG000000000	SAMN31464303	ANT-84	Longimicrobiales bacterium
GCA_028821975.1	JAPKER000000000	SAMN31464340	ANT-121	Longimicrobiales bacterium
GCA_028823235.1	JAPKBW000000000	SAMN31464267	ANT-48	Longimicrobiales bacterium
GCA_028823415.1	JAPKBL000000000	SAMN31464256	ANT-37	Mariniblastus sp.
GCA_028823485.1	JAPKBG000000000	SAMN31464251	ANT-32	Methylophilaceae bacterium
GCA_028823245.1	JAPKBV000000000	SAMN31464266	ANT-47	Myxococcota bacterium
GCA_028823175.1	JAPKBZ000000000	SAMN31464270	ANT-51	Myxococcota bacterium
GCA_028823075.1	JAPKCE000000000	SAMN31464275	ANT-56	Myxococcota bacterium
GCA_028822785.1	JAPKCX000000000	SAMN31464294	ANT-75	Nevskia sp.
GCA_028822555.1	JAPKDM000000000	SAMN31464309	ANT-90	Nitrosomonadaceae bacterium
GCA_028822865.1	JAPKCU000000000	SAMN31464291	ANT-72	Nitrosopumilus sp.
GCA_028825175.1	JAPKAQ000000000	SAMN31464235	ANT-16	Nitrospinaceae bacterium
GCA_028822815.1	JAPKCW000000000	SAMN31464293	ANT-74	Nitrospinaceae bacterium
GCA_028822355.1	JAPKDX000000000	SAMN31464320	ANT-101	Nocardioides sp.
GCA_028823515.1	JAPKBE000000000	SAMN31464249	ANT-30	Novosphingopyxis baekryungensis
GCA_028825445.1	JAPKAD000000000	SAMN31464222	ANT-3	Octadecabacter sp.
GCA_028822375.1	JAPKDW000000000	SAMN31464319	ANT-100	Opitutaceae bacterium
GCA_028822685.1	JAPKDD000000000	SAMN31464300	ANT-81	Opitutales bacterium
GCA_028821685.1	JAPKFH000000000	SAMN31464356	ANT-137	Opitutales bacterium
GCA_028825355.1	JAPKAG000000000	SAMN31464225	ANT-6	Paraburkholderia fungorum
GCA_028872745.1	JAPKAT000000000	SAMN31464238	ANT-19	Paracoccaceae bacterium
GCA_028872735.1	JAPKBF000000000	SAMN31464250	ANT-31	Paracoccaceae bacterium
GCA_028872635.1	JAPKEG000000000	SAMN31464329	ANT-110	Paracoccaceae bacterium
GCA_028825155.1	JAPKAS000000000	SAMN31464237	ANT-18	Phycisphaerales bacterium
GCA_028823105.1	JAPKCC000000000	SAMN31464273	ANT-54	Phycisphaerales bacterium
GCA_028822595.1	JAPKDH000000000	SAMN31464304	ANT-85	Pirellulaceae bacterium
GCA_028822025.1	JAPKEP000000000	SAMN31464338	ANT-119	Pirellulaceae bacterium
GCA_028824935.1	JAPKBC000000000	SAMN31464247	ANT-28	Pirellulales bacterium
GCA_028825125.1	JAPKAU000000000	SAMN31464239	ANT-20	Planctomycetota bacterium
GCA_028825265.1	JAPKAM000000000	SAMN31464231	ANT-12	Planctomycetota bacterium
GCA_028821965.1	JAPKES000000000	SAMN31464341	ANT-122	Planctomycetota bacterium
GCA_028821845.1	JAPKEZ000000000	SAMN31464348	ANT-129	Planctomycetota bacterium
GCA_028823185.1	JAPKBY000000000	SAMN31464269	ANT-50	Planctomycetota bacterium
GCA_028823395.1	JAPKBO000000000	SAMN31464259	ANT-40	Planctomycetota bacterium
GCA_028823345.1	JAPKBR000000000	SAMN31464262	ANT-43	Planctomycetota bacterium
GCA_028823195.1	JAPKBX000000000	SAMN31464268	ANT-49	Planctomycetota bacterium
GCA_026421265.1	JAPKBJ000000000	SAMN31464254	ANT-35	Planctomycetota bacterium
GCA_026421205.1	JAPKBM000000000	SAMN31464257	ANT-38	Planctomycetota bacterium
GCA_028822195.1	JAPKEE000000000	SAMN31464327	ANT-108	Planktomarina sp.
GCA_028822175.1	JAPKEF000000000	SAMN31464328	ANT-109	Planktomarina sp.
GCA_028822275.1	JAPKEA000000000	SAMN31464323	ANT-104	Planktomarina sp.
GCA_028822255.1	JAPKEC000000000	SAMN31464325	ANT-106	Porticoccaceae bacterium
GCA_028822315.1	JAPKDY000000000	SAMN31464321	ANT-102	Porticoccaceae bacterium
GCA_028822155.1	JAPKEJ000000000	SAMN31464332	ANT-113	Porticoccaceae bacterium
GCA_028823045.1	JAPKCD000000000	SAMN31464274	ANT-55	Porticoccaceae bacterium
GCA_028822945.1	JAPKCN000000000	SAMN31464284	ANT-65	Porticoccaceae bacterium
GCA_028822125.1	JAPKEK000000000	SAMN31464333	ANT-114	Pseudomonadales bacterium
GCA_028825215.1	JAPKAO000000000	SAMN31464233	ANT-14	Pseudomonadales bacterium
GCA_028825295.1	JAPKAK000000000	SAMN31464229	ANT-10	Pseudomonadales bacterium
GCA_028825405.1	JAPKAE000000000	SAMN31464223	ANT-4	Pseudomonadales bacterium
GCA_028822915.1	JAPKCO000000000	SAMN31464285	ANT-66	Psychrobacter pacificensis
GCA_028822445.1	JAPKDQ000000000	SAMN31464313	ANT-94	Rhodospirillaceae bacterium
GCA_028825025.1	JAPKAX000000000	SAMN31464242	ANT-23	Rhodospirillales bacterium
GCA_028821775.1	JAPKFB000000000	SAMN31464350	ANT-131	Roseibacillus sp.
GCA_028823035.1	JAPKCI000000000	SAMN31464279	ANT-60	Rubripirellula sp.
GCA_028822095.1	JAPKEN000000000	SAMN31464336	ANT-117	SAR202 cluster bacterium
GCA_026421125.1	JAPKDC000000000	SAMN31464299	ANT-80	SAR202 cluster bacterium
GCA_028822475.1	JAPKDT000000000	SAMN31464316	ANT-97	SAR324 cluster bacterium
GCA_028822455.1	JAPKDS000000000	SAMN31464315	ANT-96	SAR324 cluster bacterium
GCA_028823295.1	JAPKBT000000000	SAMN31464264	ANT-45	SAR324 cluster bacterium
GCA_028822295.1	JAPKEB000000000	SAMN31464324	ANT-105	Salibacteraceae bacterium
GCA_028825435.1	JAPKAC000000000	SAMN31464221	ANT-2	Schleiferiaceae bacterium
GCA_028822505.1	JAPKDP000000000	SAMN31464312	ANT-93	Schleiferiaceae bacterium
GCA_028825205.1	JAPKAP000000000	SAMN31464234	ANT-15	Sphingobium sp.
GCA_028823055.1	JAPKCG000000000	SAMN31464277	ANT-58	Sphingomonas bacterium
GCA_026421135.1	JAPKCR000000000	SAMN31464288	ANT-69	Sulfitobacter sp.
GCA_028822225.1	JAPKED000000000	SAMN31464326	ANT-107	Ulvibacter sp.
GCA_028821735.1	JAPKFD000000000	SAMN31464352	ANT-133	Verrucomicrobiales bacterium
GCA_028872715.1	JAPKCF000000000	SAMN31464276	ANT-57	Verrucomicrobiota bacterium
GCA_028872685.1	JAPKEI000000000	SAMN31464331	ANT-112	Verrucomicrobiota bacterium
GCA_028872675.1	JAPKDB000000000	SAMN31464298	ANT-79	Verrucomicrobiota bacterium
GCA_028872645.1	JAPKDK000000000	SAMN31464307	ANT-88	Verrucomicrobiota bacterium
GCA_028822635.1	JAPKDF000000000	SAMN31464302	ANT-83	Vicinamibacterales bacterium
GCA_028822435.1	JAPKDR000000000	SAMN31464314	ANT-95	Woeseiaceae bacterium
GCA_028822185.1	JAPKEH000000000	SAMN31464330	ANT-111	Woeseiaceae bacterium
GCA_028822065.1	JAPKEL000000000	SAMN31464334	ANT-115	Woeseiaceae bacterium
GCA_028822885.1	JAPKCP000000000	SAMN31464286	ANT-67	Yoonia sp.
GCA_028825015.1	JAPKBA000000000	SAMN31464245	ANT-26	Yoonia sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	3,499
Data volume, Tbytes	1.14

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marine metagenome

Western Antarctic Peninsula Metagenomes Metagenome

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