See
Genome Information for Ictalurus punctatus
The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA281269). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
| Accession | PRJNA327588 |
| Data Type | RefSeq Genome sequencing and assembly |
| Scope | Multiisolate |
| Organism | Ictalurus punctatus[Taxonomy ID: 7998] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus; Ictalurus punctatus |
| Publications (total 5) Less... | - Waldbieser GC et al., "Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions.", BMC Biol, 2023 Apr 3;21(1):67
More...- Waldbieser GC et al., "Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions.", BMC Biol, 2023 Apr 3;21(1):67
- Liu Z et al., "The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts.", Nat Commun, 2016 Jun 2;7:11757
- Zeng Q et al., "Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis.", Biol Reprod, 2016 Jul;95(1):19
- Liu S et al., "Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.", BMC Genomics, 2012 Nov 5;13:595
- Waldbieser GC et al., "Complete sequence and characterization of the channel catfish mitochondrial genome.", DNA Seq, 2003 Aug;14(4):265-77
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| Submission | Registration date: 9-Jun-2016
Auburn University |
| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 58036 |
| Transcript | 57871 |
| Protein Sequences | 51243 |
| Publications |
| PubMed | 5 |
| PMC | 4 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related GenBank Project
PRJNA281269 : Ictalurus punctatus Genome sequencing and assembly