ID 884616 - BioProject

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Accession: PRJEB56304 ID: 884616

EMG produced TPA metagenomics assembly of PRJNA482836 data set (Gut microbiome from Piaractus mesopotamicus Metagenome).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA482836, and was assembled with metaSPAdes v3. More...

Accession	PRJEB56304
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 27-Sep-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	874
WGS master	25
Publications
PubMed	1
PMC	1
Other datasets
BioSample	25
Assembly	25

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

25
25

Assembly	WGS	BioSample	Taxonomy
GCA_947074315.1	CAMTPB000000000	SAMEA111477436	Cetobacterium somerae
GCA_947074285.1	CAMTPE000000000	SAMEA111477431	Klebsiella quasipneumoniae
GCA_947074175.1	CAMTOP000000000	SAMEA111477440	Plesiomonas shigelloides
GCA_947074255.1	CAMTOY000000000	SAMEA111477434	uncultured Bacteroidales bacterium
GCA_947074105.1	CAMTON000000000	SAMEA111477435	uncultured Bacteroidales bacterium
GCA_947074245.1	CAMTOW000000000	SAMEA111477441	uncultured Bacteroidales bacterium
GCA_947074145.1	CAMTOJ000000000	SAMEA111477438	uncultured Bacteroidales bacterium
GCA_947074165.1	CAMTOT000000000	SAMEA111477428	uncultured Bacteroidales bacterium
GCA_947074295.1	CAMTPC000000000	SAMEA111477430	uncultured Bacteroides sp.
GCA_947074345.1	CAMTPH000000000	SAMEA111477445	uncultured Bacteroides sp.
GCA_947074275.1	CAMTPA000000000	SAMEA111477439	uncultured Bacteroides sp.
GCA_947074205.1	CAMTOQ000000000	SAMEA111477447	uncultured Bacteroides sp.
GCA_947074195.1	CAMTOS000000000	SAMEA111477429	uncultured Bacteroides sp.
GCA_947074235.1	CAMTOV000000000	SAMEA111477449	uncultured Bacteroides sp.
GCA_947074215.1	CAMTOU000000000	SAMEA111477442	uncultured Cetobacterium sp.
GCA_947074305.1	CAMTOZ000000000	SAMEA111477432	uncultured Citrobacter sp.
GCA_947074125.1	CAMTOM000000000	SAMEA111477452	uncultured Desulfovibrionaceae bacterium
GCA_947074115.1	CAMTOK000000000	SAMEA111477433	uncultured Erysipelotrichaceae bacterium
GCA_947074155.1	CAMTOR000000000	SAMEA111477443	uncultured Firmicutes bacterium
GCA_947074325.1	CAMTPF000000000	SAMEA111477451	uncultured Methanocorpusculaceae archaeon
GCA_947074185.1	CAMTOO000000000	SAMEA111477450	uncultured Negativicutes bacterium
GCA_947074335.1	CAMTPG000000000	SAMEA111477444	uncultured Parabacteroides sp.
GCA_947074265.1	CAMTPD000000000	SAMEA111477437	uncultured Porphyromonadaceae bacterium
GCA_947074135.1	CAMTOL000000000	SAMEA111477448	uncultured Rikenellaceae bacterium
GCA_947074225.1	CAMTOX000000000	SAMEA111477446	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA482836 data set (Gut microbiome from Piaractus mesopotamicus Metagenome).

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