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Links from Nucleotide

Accession: PRJNA418767 ID: 418767

Pyricularia oryzae

Pyricularia oryzae Genome sequencing and assembly

See Genome Information for Pyricularia oryzae
Deciphering the adaptive evolutionary patterns associated with biogeogrpahic diversity in the finger millet blast pathogen Magnaporthe oryzae: Development of a reference genome sequence of a fungal isolate from East Africa. More...
AccessionPRJNA418767
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "Nigerian Government development initiative scholarship" (Grant ID Presidential award scheme, National Universities Commission)
  • "Unraveling the molecular genetics of finger millet blast disease and the existing resistance for the development of high -yielding resilient varieties" (Grant ID PEARL, Bill and Melinda Gates Foundation)
SubmissionRegistration date: 16-Nov-2017
University of Bedfordshire
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)28337
WGS master34
SRA Experiments38
Protein Sequences418526
Other datasets
BioSample44
Assembly34
Assembly details:
Assembly levelNumber of Assemblies
16
18
34
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_024704025.1ScaffoldJABSND000000000SAMN15040830
D15/s37
GCA_024704135.1ScaffoldJABSNF000000000SAMN15040826
D1/s49
GCA_024704195.1ScaffoldJABULU000000000SAMN15040823
K17
GCA_024704115.1ScaffoldJABULT000000000SAMN15040827
D9/s50
GCA_024704165.1ScaffoldJABSNH000000000SAMN15040824
D15/s6
GCA_024704055.1ScaffoldJABSNE000000000SAMN15040828
D10/s71
GCA_024703685.1ScaffoldJABWCZ000000000SAMN15098633
K5/24W
GCA_024703655.1ScaffoldJABSNB000000000SAMN15040832
D1/s50
GCA_024703665.1ScaffoldJABSNC000000000SAMN15040831
D1/s53b
GCA_024703975.1ScaffoldJABWDA000000000SAMN15098632
T6
GCA_024704035.1ScaffoldJABULS000000000SAMN15040829
D10/s9
GCA_024704255.1ScaffoldJABSNJ000000000SAMN15040820
K28/82w
GCA_024704235.1ScaffoldJABSNI000000000SAMN15040821
K7/28w
GCA_024704225.1ScaffoldJABULV000000000SAMN15040822
K13
GCA_024704685.1ContigVRKY00000000SAMN12143006
D1/s11
GCA_024704655.1ContigVRKZ00000000SAMN12143007
D8/s15
GCA_024704695.1ContigVRKX00000000SAMN12143005
E17
GCA_024704625.1ContigVRLA00000000SAMN12143008
E1
GCA_024704315.1ContigVRLL00000000SAMN12143019
T5
GCA_024704405.1ContigVRLJ00000000SAMN12143017
E7
GCA_024704305.1ContigVRLM00000000SAMN12143020
T12
GCA_024704415.1ContigVRLI00000000SAMN12143016
U47
GCA_024704275.1ScaffoldJABULW000000000SAMN15040819
K65/159w
GCA_024704145.1ScaffoldJABSNG000000000SAMN15040825
D14/s30
GCA_024704605.1ContigVRLB00000000SAMN12143009
K38
GCA_024704475.1ContigVRLG00000000SAMN12143014
T11
GCA_024704575.1ContigVRLC00000000SAMN12143010
D15/s47
GCA_024704505.1ContigVRLE00000000SAMN12143012
K48/115n
GCA_024704485.1ContigVRLF00000000SAMN12143013
K5
GCA_024704515.1ContigVRLD00000000SAMN12143011
K13/67
GCA_024704445.1ContigVRLH00000000SAMN12143015
U13
GCA_024704335.1ContigVRLK00000000SAMN12143018
T17
GCA_021442365.1ContigPHFK00000000SAMN08033374
K23/123
GCA_021845515.1ContigVIDS00000000SAMN12142210
E34
SRA Data Details
ParameterValue
Data volume, Gbases159
Data volume, Mbytes71380

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