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Accession: PRJNA325243 ID: 325243

Veterinary Pathogens - from archived samples

Vet-LIRN Archived Isolate Sequencing Project

Veterinary Pathogens sequenced as part of the effort to enhance FDA’s database for source-tracking outbreak strains-Historical Archived Isolates.
AccessionPRJNA325243
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 10-Jun-2016
Vet-LIRN-CVM-FDA
RelevanceVeterinary Medicine
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)915
WGS master909
Genomic DNA6
SRA Experiments1114
Protein Sequences9193
Other datasets
BioSample1115
Assembly911
Assembly details:
Assembly levelNumber of Assemblies
2
909
911
AssemblyLevelWGSChrsBioSampleInfraspecies IdTaxonomy
GCA_015709225.1ContigJADNRS000000000
SAMN16288725
QMP CG1-1743
GCA_022950535.1ContigABFTAI000000000
SAMN26926579
AG21-0639
GCA_029712845.1ContigABLMJI000000000
SAMN14148614
AG20-0008
GCA_034376225.1ContigABPLJT000000000
SAMN38812459
W232830010-1-6
GCA_039767315.1ContigABSJPC000000000
SAMN41494602
800.458-cc-67
GCA_039811085.1ContigABSLFP000000000
SAMN41523229
800.458-cc-103-Bc2
GCA_040216375.1ContigABSZMP000000000
SAMN41879325
8683-Feed1
GCA_040626075.1ContigABTLAU000000000
SAMN42434958
800-472-Bcereus
GCA_041510425.1ContigABUHMA000000000
SAMN43365970
800470-Food1-BCER
GCA_041510405.1ContigABUHLY000000000
SAMN43365969
800470-Feces2-BCER
GCA_041510385.1ContigABUHLZ000000000
SAMN43365968
800470-Feces1-BCER
GCA_040872225.1ContigABTQZD000000000
SAMN42814746
W241580041-1-1
GCA_037068315.1ContigABQPNJ000000000
SAMN40263647
800-458-01
GCA_036920315.1ContigABQLJR000000000
SAMN40192583
NYVetLIRN-332-800-458
GCA_038053915.1ContigABRRBR000000000
SAMN40919115
AG24-0115
GCA_038407395.1ContigABRUOF000000000
SAMN41003260
NYVetLIRN-336-800-458
GCA_034360825.1ContigABPLAZ000000000
SAMN38812458
W232830010-1-5
GCA_043931895.1ContigABWAKD000000000
SAMN44333220
NJDA-WGS-392
GCA_043938085.1ContigABWALG000000000
SAMN44333219
NJDA-WGS-391
GCA_039302775.1ContigABRZNQ000000000
SAMN40192586
NYVetLIRN-335
GCA_039518155.1ContigABSAWF000000000
SAMN40192585
NYVetLIRN-334-800-458
GCA_039306685.1ContigABRZUE000000000
SAMN40192584
NYVetLIRN-333-800-458
GCA_029729595.1ContigABLMVU000000000
SAMN12548000
OTH-18-VL-LA-PA-Ryan-0039
GCA_027867585.1ContigABKAVZ000000000
SAMN32579332
AG22-0126
GCA_034260845.1ContigABPJFG000000000
SAMN38730545
AG23-0345
GCA_042334315.1ContigABVELI000000000
SAMN43944288
AG24-0454
GCA_042332315.1ContigABVEHO000000000
SAMN43944289
AG24-0455
GCA_040145705.1ContigABSWUQ000000000
SAMN41805548
AG24-0128
GCA_036591745.1ContigABQGIZ000000000
SAMN39935442
AG24-0001
GCA_005296425.1ContigAACNUF000000000
SAMN10581924
OH-18-23907
GCA_029046725.1ContigABKYAP000000000
SAMN33612929
AG23-0085
GCA_036591765.1ContigABQGIY000000000
SAMN39935443
AG24-0002
GCA_038487845.1ContigABRWZX000000000
SAMN41082719
AG24-0123
GCA_021829925.1ContigABEXHI000000000
SAMN25553380
3333-1
GCA_022950515.1ContigABFTAG000000000
SAMN26926583
AG21-0645
GCA_016076935.1ContigAAXVRW000000000
SAMN09465053
ADRDL-1956
GCA_032806885.1ContigABOADY000000000
SAMN37859283
W232570042-3
GCA_032774395.1ContigABNYKA000000000
SAMN35816565
800429-08-LAVetLIRN
GCA_032774435.1ContigABNYJX000000000
SAMN35816564
800429-07-LAVetLIRN
GCA_032774355.1ContigABNYJZ000000000
SAMN35816562
800429-05-LAVetLIRN
GCA_032774375.1ContigABNYKB000000000
SAMN35816563
800429-06-LAVetLIRN
GCA_033390155.1ContigABOQBM000000000
SAMN38117156
NYVetLIRN-331-800-449
GCA_016725105.1ContigAAYTTG000000000
SAMN17384254
AG21-0285
GCA_016611845.1ContigAAYRWE000000000
SAMN17283086
NYVetLIRN-256-800-358
GCA_016610865.1ContigAAYRUI000000000
SAMN17283083
NYVetLIRN-253-800-358
GCA_016610845.1ContigAAYRUH000000000
SAMN17283084
NYVetLIRN-254-800-358
GCA_016610805.1ContigAAYRUK000000000
SAMN17283089
NYVetLIRN-259-800-358
GCA_016610765.1ContigAAYRUF000000000
SAMN17283087
NYVetLIRN-257-800-358
GCA_016085335.1ContigAAXWEN000000000
SAMN06160715
B16-24350-1CP
GCA_016074775.1ContigAAXVPS000000000
SAMN10724003
VL-800.292-CP-14031.1
GCA_016074745.1ContigAAXVPT000000000
SAMN10724005
VL-800.292-CP-14031.3
GCA_016074735.1ContigAAXVPR000000000
SAMN10724004
VL-800.292-CP-14031.2
GCA_016071175.1ContigAAXVKI000000000
SAMN11102869
800-299 FEC-1B
GCA_016071135.1ContigAAXVKH000000000
SAMN11936842
AG19-0223
GCA_016071095.1ContigAAXVKG000000000
SAMN12095131
AG19-0228
GCA_016070855.1ContigAAXVKF000000000
SAMN12108829
NYVetLIRN-153
GCA_016068655.1ContigAAXVKC000000000
SAMN12497055
CP-19-VL-LA-CO-800.311
GCA_016068815.1ContigAAXVKE000000000
SAMN12185880
VL-800.306-CP-D1903487
GCA_015964235.1ContigAAXUVA000000000
SAMN13352372
800321-19-VL-LA-MO-FECC2
GCA_015947665.1ContigAAXUFE000000000
SAMN13898683
VL-800-322-CP-3
GCA_015947765.1ContigAAXUFC000000000
SAMN13898682
VL-800-322-CP-2
GCA_015947745.1ContigAAXUFD000000000
SAMN13898681
VL-800-322-CP-1
GCA_015943605.1ContigAAXUEZ000000000
SAMN14148688
AG20-0011
GCA_015943685.1ContigAAXUFA000000000
SAMN12995152
VL-800-320-CP-1
GCA_015943625.1ContigAAXUFB000000000
SAMN12995153
VL-800-320-CP-2
GCA_015929725.1ContigAAXTYY000000000
SAMN16124842
LA-VetLIRN-800-348-4
GCA_015929765.1ContigAAXTYZ000000000
SAMN16124843
LA-VetLIRN-800-348-6
GCA_015902325.1ContigAAXSKY000000000
SAMN16551968
LA-VetLIRN-800-348-5
GCA_019082185.1ContigABBBTQ000000000
SAMN19945947
NYVetLIRN-286-800-379
GCA_018992235.1ContigABAYSM000000000
SAMN17773437
VL-800.357-M20-27370-1-4A
GCA_019003805.1ContigABAZCD000000000
SAMN19812475
NYVetLIRN-284-800-379
GCA_019004285.1ContigABAZCW000000000
SAMN19812476
NYVetLIRN-285-800-379
GCA_019003865.1ContigABAZCG000000000
SAMN19812477
NYVetLIRN-287-800-379
GCA_020730565.1ContigABDQKQ000000000
SAMN22837342
NYVetLirn-316
GCA_022218085.1ContigABFBQI000000000
SAMN25867891
008999-22-1-12
GCA_021834335.1ContigABEXIC000000000
SAMN25553383
3838-1
GCA_028173205.1ContigABKJAR000000000
SAMN32907814
80304-OTH-022
GCA_029675925.1ContigABLLSH000000000
SAMN22366631
CRE-21-VL-LA-PA-Ryan-0089
GCA_029675865.1ContigABLLSE000000000
SAMN22366630
CRE-21-VL-LA-PA-Ryan-0088
GCA_029675845.1ContigABLLSF000000000
SAMN22366621
CRE-21-VL-LA-PA-Ryan-0079
GCA_029675825.1ContigABLLSD000000000
SAMN22366620
CRE-21-VL-LA-PA-Ryan-0078
GCA_029675805.1ContigABLLSC000000000
SAMN22366629
CRE-21-VL-LA-PA-Ryan-0087
GCA_029675785.1ContigABLLSB000000000
SAMN22366628
CRE-21-VL-LA-PA-Ryan-0086
GCA_029675765.1ContigABLLRY000000000
SAMN22366625
CRE-21-VL-LA-PA-Ryan-0083
GCA_029675745.1ContigABLLSA000000000
SAMN22366627
CRE-21-VL-LA-PA-Ryan-0085
GCA_029675725.1ContigABLLRZ000000000
SAMN22366626
CRE-21-VL-LA-PA-Ryan-0084
GCA_029675705.1ContigABLLRV000000000
SAMN22366624
CRE-21-VL-LA-PA-Ryan-0082
GCA_029675685.1ContigABLLRW000000000
SAMN22366623
CRE-21-VL-LA-PA-Ryan-0081
GCA_029675665.1ContigABLLRT000000000
SAMN22366646
CRE-21-VL-LA-PA-Ryan-0104
GCA_029675645.1ContigABLLRX000000000
SAMN22366648
CRE-21-VL-LA-PA-Ryan-0107
GCA_029675625.1ContigABLLRU000000000
SAMN22366645
CRE-21-VL-LA-PA-Ryan-0103
GCA_029675585.1ContigABLLRS000000000
SAMN22366622
CRE-21-VL-LA-PA-Ryan-0080
GCA_029675565.1ContigABLLRI000000000
SAMN31551492
CRE-22-VL-LA-PA-RYAN-0113
GCA_029675445.1ContigABLLRQ000000000
SAMN28522343
CRE-22-VL-LA-PA-RYAN-0111
GCA_022950455.1ContigABFTAD000000000
SAMN26926573
AG21-0632
GCA_015329925.1ContigAAXECR000000000
SAMN11604707
OH-19-7300
GCA_022950475.1ContigABFTAF000000000
SAMN26926574
AG21-0633
GCA_036042095.1ContigABPZIC000000000
SAMN26926580
AG21-0641
GCA_036044195.1ContigABPZIS000000000
SAMN25553389
3845-2
GCA_015499175.1ContigAAXGQB000000000
SAMN14148984
AG20-0006
GCA_015499055.1ContigAAXGQC000000000
SAMN14148601
AG20-0005
GCA_015499035.1ContigAAXGPY000000000
SAMN14148980
AG20-0007
GCA_018933755.1ContigABAWLF000000000
SAMN19161851
AG21-0331
GCA_036185405.1ContigABQACK000000000
SAMN17773436
VL-800.357-20-23343-4
GCA_018977545.1ContigABAYAF000000000
SAMN19775497
2021-4934-2
GCA_023514645.1ContigABGHMC000000000
SAMN28522342
CRE-22-VL-LA-PA-RYAN-0110
GCA_023548645.1ContigABGJBX000000000
SAMN28632846
CRE-22-VL-LA-PA-RYAN-0112
GCA_029619615.1ContigABLKFA000000000
SAMN34101269
800429-02-LAVetLIRN
GCA_029619575.1ContigABLKEZ000000000
SAMN34101270
800429-03-LAVetLIRN
GCA_029619295.1ContigABLKFD000000000
SAMN34101271
800429-04-LAVetLIRN
GCA_029621225.1ContigABLKFW000000000
SAMN34101268
800429-01-LAVetLIRN
GCA_028172825.1ContigABKIZY000000000
SAMN32907822
800421-LAVetLIRN
GCA_028172805.1ContigABKJAA000000000
SAMN32907816
80304-OTH-024
GCA_028331985.1ContigABKKPJ000000000
SAMN32963644
22-42121-k9
GCA_012697545.1ContigAATBGX000000000
SAMN14147594
NYVetLIRN-216
GCA_012697305.1ContigAATBGK000000000
SAMN14149093
NYVetLIRN-218
GCA_012697405.1ContigAATBGT000000000
SAMN14147608
NYVetLIRN-217
GCA_012652105.1ContigAASYXQ000000000
SAMN13928225
NYVetLIRN-209
GCA_012652065.1ContigAASYXO000000000
SAMN13928226
NYVetLIRN-210
GCA_012652015.1ContigAASYXS000000000
SAMN13928287
803-04-OTH-009
GCA_012651985.1ContigAASYXN000000000
SAMN13928325
NYVetLIRN-211
GCA_012651965.1ContigAASYXP000000000
SAMN13928224
NYVetLIRN-213
GCA_012651945.1ContigAASYXK000000000
SAMN13928300
NYVetLIRN-212
GCA_012663445.1ContigAASZMZ000000000
SAMN13682809
NYVetLIRN-206
GCA_012663125.1ContigAASZMI000000000
SAMN13795923
NYVetLIRN-202
GCA_012662805.1ContigAASZMG000000000
SAMN13781429
NYVetLIRN-203
GCA_012659645.1ContigAASZID000000000
SAMN13898678
VL-800-322-ECOL-1
GCA_012625925.1ContigAASXNV000000000
SAMN12799322
NYVetLIRN-177
GCA_012624585.1ContigAASXLE000000000
SAMN13012618
NYVetLIRN-183
GCA_012624465.1ContigAASXLA000000000
SAMN13012702
NYVetLIRN-182
GCA_012624385.1ContigAASXLX000000000
SAMN13012526
NYVetLIRN-192
GCA_012624345.1ContigAASXLM000000000
SAMN13012477
NYVetLIRN-188
GCA_012624205.1ContigAASXLF000000000
SAMN13012613
NYVetLIRN-185
GCA_012623865.1ContigAASXLJ000000000
SAMN13012541
NYVetLIRN-186
GCA_012606475.1ContigAASWFH000000000
SAMN13540737
CRE-19-VL-LA-PA-Ryan-0030
GCA_012623165.1ContigAASXJX000000000
SAMN13050468
NYVetLIRN-196
GCA_012606395.1ContigAASWFB000000000
SAMN13540763
CRE-19-VL-LA-PA-Ryan-0054
GCA_012606335.1ContigAASWFE000000000
SAMN13540767
CRE-19-VL-LA-PA-Ryan-0052
GCA_012606215.1ContigAASWFI000000000
SAMN13540708
CRE-19-VL-LA-PA-Ryan-0060
GCA_012606155.1ContigAASWFJ000000000
SAMN13540718
CRE-19-VL-LA-PA-Ryan-0064
GCA_012606075.1ContigAASWFD000000000
SAMN13540735
CRE-19-VL-LA-PA-Ryan-0061
GCA_012605915.1ContigAASWEU000000000
SAMN13540760
CRE-19-VL-LA-PA-Ryan-0057
GCA_012605925.1ContigAASWEZ000000000
SAMN13540756
CRE-19-VL-LA-PA-Ryan-0028
GCA_012605865.1ContigAASWEY000000000
SAMN13540751
CRE-19-VL-LA-PA-Ryan-0059
GCA_012605855.1ContigAASWEW000000000
SAMN13540764
CRE-19-VL-LA-PA-Ryan-0062
GCA_012605835.1ContigAASWET000000000
SAMN13540759
CRE-19-VL-LA-PA-Ryan-0056
GCA_012605815.1ContigAASWEV000000000
SAMN13540750
CRE-19-VL-LA-PA-Ryan-0016
GCA_012605735.1ContigAASWER000000000
SAMN13540761
CRE-19-VL-LA-PA-Ryan-0053
GCA_012621885.1ContigAASXFZ000000000
SAMN13150928
ECOL-19-11939-1-1
GCA_012621895.1ContigAASXFW000000000
SAMN13150927
ECOL-19-11939-1-2
GCA_012596105.1ContigAASVNT000000000
SAMN13663207
CRE-19-VL-LA-PA-Ryan-0031
GCA_012596085.1ContigAASVNZ000000000
SAMN13662977
CRE-19-VL-LA-PA-Ryan-0066
GCA_012612145.1ContigAASWRL000000000
SAMN13352615
CRE-19-VL-LA-PA-Ryan-0045
GCA_012613265.1ContigAASWRV000000000
SAMN13352360
CRE-19-VL-LA-PA-Ryan-0046
GCA_012613285.1ContigAASWRT000000000
SAMN13352373
CRE-19-VL-LA-PA-Ryan-0040
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SAMN13352399
CRE-19-VL-LA-PA-Ryan-0050
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SAMN13352371
CRE-19-VL-LA-PA-Ryan-0042
GCA_012613105.1ContigAASWRO000000000
SAMN13352400
CRE-19-VL-LA-PA-Ryan-0043
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SAMN13352396
CRE-19-VL-LA-PA-Ryan-0047
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SAMN13352375
800321-19-VL-LA-MO-FECA1
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SAMN13352616
800321-19-VL-LA-MO-FECB1
GCA_012613005.1ContigAASWRQ000000000
SAMN13352370
CRE-19-VL-LA-PA-Ryan-0041
GCA_012619025.1ContigAASXEA000000000
SAMN13781677
NYVetLIRN-201
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SAMN13262689
CRE-19-VL-LA-PA-Ryan-0038
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SAMN13262766
CRE-19-VL-LA-PA-Ryan-0019
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SAMN13262752
CRE-19-VL-LA-PA-Ryan-0020
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SAMN13262675
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SAMN13262674
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SAMN13262677
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SAMN13262670
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SAMN13262688
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SAMN13262671
CRE-19-VL-LA-PA-Ryan-0036
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SAMN13262681
CRE-19-VL-LA-PA-Ryan-0021
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SAMN13262673
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SAMN13262693
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SAMN13262682
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SAMN13262739
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SAMN13262763
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SAMN13262754
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SAMN13662889
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SAMN13662687
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SAMN13663211
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SAMN13662976
CRE-19-VL-LA-PA-Ryan-0065
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SAMN13663201
CRE-19-VL-LA-PA-Ryan-0029
GCA_012595625.1ContigAASVNW000000000
SAMN13663195
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GCA_012595605.1ContigAASVOC000000000
SAMN13662679
CRE-19-VL-LA-PA-Ryan-0067
GCA_012595365.1ContigAASVNC000000000
SAMN13682801
NYVetLIRN-204
GCA_012595345.1ContigAASVND000000000
SAMN13682805
NYVetLIRN-205
GCA_012595305.1ContigAASVMX000000000
SAMN13682843
NYVetLIRN-200
GCA_012611465.1ContigAASWNM000000000
SAMN13429521
NYVetLIRN-198
GCA_012594905.1ContigAASVKX000000000
SAMN13898679
VL-800-322-ECOL-2
GCA_012610745.1ContigAASWNB000000000
SAMN13429602
NYVetLIRN-197
GCA_012594185.1ContigAASVLM000000000
SAMN13781473
NYVetLIRN-207
GCA_012593565.1ContigAASVKL000000000
SAMN13352353
CRE-19-VL-LA-PA-Ryan-0048
GCA_012593525.1ContigAASVKP000000000
SAMN13352357
CRE-19-VL-LA-PA-Ryan-0049
GCA_012593495.1ContigAASVKM000000000
SAMN13352379
CRE-19-VL-LA-PA-Ryan-0051
GCA_012593305.1ContigAASVKJ000000000
SAMN13352381
800321-19-VL-LA-MO-FECC1
GCA_012592785.1ContigAASVHW000000000
SAMN13898680
VL-800-322-ECOL-3
GCA_012592745.1ContigAASVIC000000000
SAMN13781756
NYVetLIRN-199
GCA_012793915.1ContigAATGWH000000000
SAMN13928228
NYVetLIRN-214
GCA_012762215.1ContigAATCUD000000000
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SAMN26101445
OTH-19-VL-NY-MS-0003
GCA_022504005.1ContigABFIEN000000000
SAMN26101593
OTH-20-VL-SD-OK-0025
GCA_022505725.1ContigABFIHG000000000
SAMN26101474
OTH-19-VL-SD-NC-0029
GCA_022505245.1ContigABFIGL000000000
SAMN26101569
OTH-20-VL-SD-IA-0005
GCA_022429205.1ContigABFGED000000000
SAMN26101453
OTH-19-VL-OH-GA-0017
GCA_022429385.1ContigABFGEM000000000
SAMN26101529
OTH-20-VL-LA-PA-RYAN-0044
GCA_022505225.1ContigABFIGQ000000000
SAMN26101428
OTH-19-VL-LA-PA-Ryan-0017
GCA_022503985.1ContigABFIEH000000000
SAMN26101588
OTH-20-VL-SD-NC-0042
GCA_022503965.1ContigABFIES000000000
SAMN26101590
OTH-20-VL-SD-NC-0046
GCA_022503945.1ContigABFIEM000000000
SAMN26101589
OTH-20-VL-SD-NC-0044
GCA_022503925.1ContigABFIEO000000000
SAMN26101578
OTH-20-VL-SD-NC-0002
GCA_022505285.1ContigABFIGP000000000
SAMN26101511
OTH-19-VL-WA-NY-0020
GCA_022504085.1ContigABFIER000000000
SAMN26101612
OTH-20-VL-WA-VA-0027
GCA_022503645.1ContigABFIDX000000000
SAMN26101538
OTH-20-VL-NY-GA-0008
GCA_022503685.1ContigABFIDW000000000
SAMN26101429
OTH-19-VL-LA-PA-Ryan-0018
GCA_022503805.1ContigABFIED000000000
SAMN26101469
OTH-19-VL-SD-NC-0003
GCA_022504025.1ContigABFIEQ000000000
SAMN26101506
OTH-19-VL-WA-MO-0006
GCA_022503865.1ContigABFIEG000000000
SAMN26101477
OTH-19-VL-SD-NC-0044
GCA_022503385.1ContigABFIDN000000000
SAMN26101587
OTH-20-VL-SD-NC-0041
GCA_004730845.1ContigAABELN000000000
SAMN09788313
VL-800-268-LIST
GCA_036681375.1ContigABQHEO000000000
SAMN39962833
800456-02
GCA_004730705.1ContigAABELO000000000
SAMN08638811
NYVetLIRN-61
GCA_004726505.1ContigAABECV000000000
SAMN08611373
NYVetLIRN-58
GCA_004726445.1ContigAABECU000000000
SAMN08611371
NYVetLIRN-59
GCA_004725965.1ContigAABECR000000000
SAMN08611384
NYVetLIRN-55
GCA_004725915.1ContigAABECM000000000
SAMN07964457
Environmental
GCA_004725765.1ContigAABECW000000000
SAMN08611299
NYVetLIRN-60
GCA_004723685.1ContigAABDWS000000000
SAMN06276548
OH-16-8884-5
GCA_004723665.1ContigAABDWU000000000
SAMN06276547
OH-16-8884-6
GCA_004723585.1ContigAABDWM000000000
SAMN06276549
OH-16-8884-4
GCA_004723565.1ContigAABDWT000000000
SAMN06276550
OH-16-8884-3
GCA_004722065.1ContigAABDWR000000000
SAMN06276551
OH-16-8884-2
GCA_004724165.1ContigAABDUK000000000
SAMN08611369
NYVetLIRN-57
GCA_004730985.1ContigAABEME000000000
SAMN09951441
NYVetLIRN-106
GCA_004763525.1ContigAABGRU000000000
SAMN10368205
NYVetLIRN-117
GCA_004763465.1ContigAABGRZ000000000
SAMN10368193
NYVetLIRN-116
GCA_006093435.1ContigAAEOKR000000000
SAMN08611370
NYVetLIRN-56
GCA_005250085.1ContigAACKJP000000000
SAMN11581050
NYVetLIRN-148
GCA_019004145.1ContigABAZCT000000000
SAMN19812474
NYVetLIRN-283-803-04-011
GCA_028172445.1ContigABKIZK000000000
SAMN32907817
80304-OTH-025
GCA_028173445.1ContigABKJBC000000000
SAMN32907815
80304-OTH-023
GCA_023514625.1ContigABGHMB000000000
SAMN28522341
80304-OTH-020
GCA_021602105.1ContigABETSU000000000
SAMN24007703
CRP-21-VL-LA-KS-0019
GCA_021602065.1ContigABETST000000000
SAMN24007702
CRP-21-VL-LA-KS-0015
GCA_021645025.1ContigABEUFP000000000
SAMN22443163
2021-14579_1
GCA_022430645.1ContigABFGGS000000000
SAMN26101556
OTH-20-VL-OH-IN-0031
GCA_025607075.1ContigABIRMP000000000
SAMN31182600
ADRDL-4114
GCA_025606235.1ContigABIRLE000000000
SAMN31182603
ADRDL-4117
GCA_025606255.1ContigABIRLF000000000
SAMN31182599
ADRDL-4113
GCA_025605845.1ContigABIRKM000000000
SAMN31182605
ADRDL-4119
GCA_025605815.1ContigABIRKK000000000
SAMN31182602
ADRDL-4116
GCA_025605735.1ContigABIRKJ000000000
SAMN31182601
ADRDL-4115
GCA_025605915.1ContigABIRKP000000000
SAMN31182598
ADRDL-4112
GCA_025605895.1ContigABIRKL000000000
SAMN31182604
ADRDL-4118
GCA_006106935.1ContigAAEPJY000000000
SAMN06307824
NYVetLIRN-19
GCA_006106895.1ContigAAEPJP000000000
SAMN06307825
NYVetLIRN-18
GCA_006169505.1ContigAAETSS000000000
SAMN07776824
NYVetLIRN-44
GCA_006201465.1ContigAAEWBL000000000
SAMN08596245
800-227-01-LAVetLIRN
GCA_006050215.1ContigAAELDX000000000
SAMN06817875
NYVetLIRN-30
GCA_005903245.1ContigAAEAQU000000000
SAMN11166311
NYVetLIRN-141
GCA_005903205.1ContigAAEAQQ000000000
SAMN11166192
NYVetLIRN-143
GCA_005903175.1ContigAAEAQS000000000
SAMN11166315
NYVetLIRN-144
GCA_005903115.1ContigAAEAQV000000000
SAMN11166318
NYVetLIRN-140
GCA_005903105.1ContigAAEAQR000000000
SAMN11166133
NYVetLIRN-136
GCA_005903085.1ContigAAEAQK000000000
SAMN11166160
NYVetLIRN-139
GCA_005903065.1ContigAAEAQP000000000
SAMN11166130
NYVetLIRN-137
GCA_005903045.1ContigAAEAQM000000000
SAMN11166181
NYVetLIRN-142
GCA_005903025.1ContigAAEAQO000000000
SAMN11166129
NYVetLIRN-135
GCA_005903005.1ContigAAEAQB000000000
SAMN11002077
NYVetLIRN-128
GCA_005902985.1ContigAAEAQC000000000
SAMN11002086
NYVetLIRN-124
GCA_005902965.1ContigAAEAQN000000000
SAMN11166127
NYVetLIRN-138
GCA_005902945.1ContigAAEAQJ000000000
SAMN11166126
NYVetLIRN-126
GCA_005902925.1ContigAAEAQD000000000
SAMN11002391
NYVetLIRN-129
GCA_005902905.1ContigAAEAPW000000000
SAMN11001674
NYVetLIRN-119
GCA_005902885.1ContigAAEAQL000000000
SAMN11166125
NYVetLIRN-134
GCA_005902865.1ContigAAEAQF000000000
SAMN11002385
NYVetLIRN-125
GCA_005902845.1ContigAAEAPY000000000
SAMN11001664
NYVetLIRN-121
GCA_005902825.1ContigAAEAQA000000000
SAMN11002082
NYVetLIRN-127
GCA_005902805.1ContigAAEAPZ000000000
SAMN11000474
NYVetLIRN-123
GCA_005902765.1ContigAAEAPX000000000
SAMN11000346
NYVetLIRN-120
GCA_005902745.1ContigAAEAPT000000000
SAMN10999870
NYVetLIRN-122
GCA_005902705.1ContigAAEAPP000000000
SAMN10999391
NYVetLIRN-133
GCA_005902685.1ContigAAEAPQ000000000
SAMN10999634
NYVetLIRN-130
GCA_005902645.1ContigAAEAPR000000000
SAMN10997809
NYVetLIRN-132
GCA_005902665.1ContigAAEAPV000000000
SAMN10999641
NYVetLIRN-131
GCA_005902605.1ContigAAEAPL000000000
SAMN10997748
NYVetLIRN-118
GCA_005987925.1ContigAAEGRS000000000
SAMN06307826
NYVetLIRN-17
GCA_005984905.1ContigAAEGMG000000000
SAMN06276546
OH-16-8884-7
GCA_006483925.1ContigAAFLNV000000000
SAMN12108810
NYVetLIRN-151
GCA_025605875.1ContigABIRKO000000000
SAMN31182595
ADRDL-4109
GCA_025605835.1ContigABIRKN000000000
SAMN31182593
ADRDL-4107
GCA_025606215.1ContigABIRLD000000000
SAMN31182591
ADRDL-4105
GCA_025606155.1ContigABIRLC000000000
SAMN31182590
ADRDL-4104
GCA_025606475.1ContigABIRLJ000000000
SAMN31182594
ADRDL-4108
GCA_025606465.1ContigABIRLL000000000
SAMN31182592
ADRDL-4106
GCA_025604245.1ContigABIRHV000000000
SAMN31182597
ADRDL-4111
GCA_025604305.1ContigABIRHT000000000
SAMN31182596
ADRDL-4110
GCA_007538355.1ContigAAIFZS000000000
SAMN12175430
NYVetLIRN-159
GCA_007449065.1ContigAAHZFM000000000
SAMN12174600
NYVetLIRN-154
GCA_007824445.1ContigAAIYSK000000000
SAMN12175400
NYVetLIRN-158
GCA_007799715.1ContigAAIWYU000000000
SAMN12175103
NYVetLIRN-157
GCA_007799435.1ContigAAIWYE000000000
SAMN12190426
SAL-17-VL-LA-TX-0031
GCA_007799235.1ContigAAIWXZ000000000
SAMN12175379
NYVetLIRN-156
GCA_007799095.1ContigAAIWXO000000000
SAMN12174604
NYVetLIRN-155
GCA_008537575.1ContigAAKSYY000000000
SAMN10235312
NYVetLIRN-107
GCA_008439585.1ContigAAKKVW000000000
SAMN08448934
NYVetLIRN-52
GCA_008463945.1ContigAAKMQL000000000
SAMN10235319
NYVetLIRN-110
GCA_008463925.1ContigAAKMQH000000000
SAMN10235320
NYVetLIRN-109
GCA_008461905.1ContigAAKMQD000000000
SAMN10235310
NYVetLIRN-108
GCA_008492025.1ContigAAKOQQ000000000
SAMN08649122
NYVetLIRN-62
GCA_008221265.1ContigAAJXXH000000000
SAMN12548001
NYVetLIRN-167
GCA_008201265.1ContigAAJWJA000000000
SAMN12532879
NYVetLIRN-160
GCA_008201905.1ContigAAJWJE000000000
SAMN12532895
NYVetLIRN-165
GCA_008201665.1ContigAAJWJB000000000
SAMN12532900
NYVetLIRN-166
GCA_008204465.1ContigAAJWJI000000000
SAMN12533024
NYVetLIRN-161
GCA_006667185.1ContigAAFXTM000000000
SAMN09788311
VL-800-268-SAL
GCA_006802025.1ContigAAGHKW000000000
SAMN09428135
NYVetLIRN-74
GCA_006801525.1ContigAAGHKX000000000
SAMN09951450
NYVetLIRN-102
GCA_006833445.1ContigAAGJRB000000000
SAMN09951444
NYVetLIRN-103
GCA_006515615.1ContigAAFNHX000000000
SAMN10359221
NYVetLIRN-115
GCA_006568765.1ContigAAFQMZ000000000
SAMN09951447
NYVetLIRN-105
GCA_006624065.1ContigAAFUOG000000000
SAMN09951455
NYVetLIRN-104
GCA_006954685.1ContigAAGSFP000000000
SAMN06276545
OH-16-8884-8
GCA_006943065.1ContigAAGRIW000000000
SAMN06276543
OH-16-25847-A
GCA_006924695.1ContigAAGQBI000000000
SAMN06276544
OH-16-3844
GCA_007087445.1ContigAAHBCA000000000
SAMN07964456
Environmental
GCA_010578305.1ContigAAOCWR000000000
SAMN08448937
NYVetLIRN-48
GCA_010890935.1ContigAAOWXV000000000
SAMN08448931
NYVetLIRN-51
GCA_010983475.1ContigAAPDOU000000000
SAMN08649123
NYVetLIRN-64
GCA_011594085.1ContigAAQKTZ000000000
SAMN08448933
NYVetLIRN-53
GCA_011642145.1ContigAAQNVN000000000
SAMN08448930
NYVetLIRN-49
GCA_010004105.1ContigAANBVC000000000
SAMN08649124
NYVetLIRN-63
GCA_009124045.1ContigAAMBRD000000000
SAMN06307822
ATCC 14028s
GCA_009161065.1ContigAAMBQU000000000
SAMN06307819
ATCC 14028s
GCA_009123145.1ContigAAMBQZ000000000
SAMN06307821
ATCC 14028s
GCA_009123245.1ContigAAMBRA000000000
SAMN06307823
ATCC 14028s
GCA_009254245.1ContigAAMIPU000000000
SAMN13012517
NYVetLIRN-194
GCA_009507515.1ContigAAMUFG000000000
SAMN07682585
NYVetLIRN-33
GCA_009508175.1ContigAAMUEY000000000
SAMN07682588
NYVetLIRN-36
GCA_009508115.1ContigAAMUEX000000000
SAMN07682589
NYVetLIRN-37
GCA_009572065.1ContigAAMYYR000000000
SAMN07682587
NYVetLIRN-35
GCA_009553735.1ContigAAMXOU000000000
SAMN07682586
NYVetLIRN-34
GCA_009553615.1ContigAAMXOT000000000
SAMN07682584
NYVetLIRN-32
GCA_009516435.1ContigAAMUVP000000000
SAMN07776828
NYVetLIRN-45
GCA_032037895.1ContigABMZNB000000000
SAMN36772383
803.04-OTH-031
GCA_037922425.1ContigABRMYO000000000
SAMN40722951
803.04-OTH-035
GCA_037922445.1ContigABRMYP000000000
SAMN40722952
803.04-OTH-036
GCA_040126335.1ContigABSVYR000000000
SAMN39845103
800456-01
GCA_043636845.1ContigABVZLI000000000
SAMN44253797
800.496 Salmonella
GCA_014520785.1ContigAAVYXE000000000
SAMN16089650
NYVetLIRN-250
GCA_014520765.1ContigAAVYXF000000000
SAMN16089648
NYVetLIRN-248
GCA_014520705.1ContigAAVYXG000000000
SAMN16089649
NYVetLIRN-249
GCA_016370765.1ContigAAYIND000000000
SAMN06307820
ATCC 14028s
GCA_016324925.1ContigAAYFSA000000000
SAMN08448932
NYVetLIRN-50
GCA_011703355.2ContigAAQSBP000000000
SAMN14149053
NYVetLIRN-220
GCA_015927545.1ContigAAXTVO000000000
SAMN16874504
NYVetLIRN-236-803-04-007
GCA_019811815.1ContigABCEHC000000000
SAMN21040094
W1-024
GCA_019807035.1ContigABCEJS000000000
SAMN21040097
W1-026
GCA_019811015.1ContigABCEFM000000000
SAMN21040096
W1-025
GCA_019810985.1ContigABCEFR000000000
SAMN21040095
W1-023
GCA_019810275.1ContigABCEFL000000000
SAMN21040098
W1-027
GCA_019810255.1ContigABCEFK000000000
SAMN21040093
NYVetLIRN-310
GCA_021556875.1ContigABESTR000000000
SAMN25161403
2021-16061
GCA_021554215.1ContigABESTP000000000
SAMN25161404
2021-17948
GCA_021302175.1ContigABELQU000000000
SAMN23834004
NYVetLIRN-321
GCA_021149965.1ContigABEFMN000000000
SAMN23834010
NYVetLIRN-327
GCA_021149945.1ContigABEFMT000000000
SAMN23834008
NYVetLIRN-325
GCA_021149885.1ContigABEFMW000000000
SAMN23834003
NYVetLIRN-320
GCA_021149865.1ContigABEFMO000000000
SAMN23834005
NYVetLIRN-322
GCA_021149825.1ContigABEFMS000000000
SAMN23834006
NYVetLIRN-323
GCA_021149645.1ContigABEFMF000000000
SAMN23834011
NYVetLIRN-328
GCA_021149625.1ContigABEFMB000000000
SAMN23834007
NYVetLIRN-324
GCA_021149605.1ContigABEFMC000000000
SAMN23834009
NYVetLIRN-326
GCA_018953335.1ContigABAXCJ000000000
SAMN19732399
NYVetLIRN-279
GCA_018953315.1ContigABAXCK000000000
SAMN19732398
NYVetLIRN-278
GCA_018953295.1ContigABAXCI000000000
SAMN19732397
NYVetLIRN-277
GCA_019010725.1ContigABAZPJ000000000
SAMN19812484
NYVetLIRN-294
GCA_019010705.1ContigABAZPL000000000
SAMN19812488
NYVetLIRN-298
GCA_019011025.1ContigABAZPH000000000
SAMN19812463
NYVetLIRN-269
GCA_019010985.1ContigABAZPF000000000
SAMN19812462
NYVetLIRN-268
GCA_019011095.1ContigABAZPM000000000
SAMN19812466
NYVetLIRN-272
GCA_019011125.1ContigABAZPN000000000
SAMN19812469
NYVetLIRN-275
GCA_019011085.1ContigABAZPK000000000
SAMN19812465
NYVetLIRN-271
GCA_019004125.1ContigABAZCK000000000
SAMN19812471
NYVetLIRN-280
GCA_019004105.1ContigABAZCV000000000
SAMN19812472
NYVetLIRN-281
GCA_019004085.1ContigABAZCP000000000
SAMN19812461
NYVetLIRN-267
GCA_019004165.1ContigABAZCU000000000
SAMN19812486
NYVetLIRN-296
GCA_019003845.1ContigABAZCF000000000
SAMN19812482
NYVetLIRN-292
GCA_019004265.1ContigABAZDA000000000
SAMN19812473
NYVetLIRN-282
GCA_019004465.1ContigABAZDL000000000
SAMN19812470
NYVetLIRN-276
GCA_019004425.1ContigABAZDI000000000
SAMN19812468
NYVetLIRN-274
GCA_019004405.1ContigABAZDD000000000
SAMN19812467
NYVetLIRN-273
GCA_019004385.1ContigABAZCZ000000000
SAMN19812464
NYVetLIRN-270
GCA_019004365.1ContigABAZDB000000000
SAMN19812487
NYVetLIRN-297
GCA_019004345.1ContigABAZDC000000000
SAMN19812485
NYVetLIRN-295
GCA_019004325.1ContigABAZCX000000000
SAMN19812483
NYVetLIRN-293
GCA_019083785.1ContigABBBWP000000000
SAMN19945944
NYVetLIRN-305
GCA_019083645.1ContigABBBWO000000000
SAMN19945942
NYVetLIRN-303
GCA_019082985.1ContigABBBVC000000000
SAMN19945940
NYVetLIRN-301
GCA_019082645.1ContigABBBUQ000000000
SAMN19945943
NYVetLIRN-304
GCA_019082385.1ContigABBBUD000000000
SAMN19945941
NYVetLIRN-302
GCA_019082705.1ContigABBBUO000000000
SAMN19945939
NYVetLIRN-300
GCA_019081555.1ContigABBBSN000000000
SAMN19945946
NYVetLIRN-307
GCA_019081525.1ContigABBBSL000000000
SAMN19945938
NYVetLIRN-299
GCA_019081505.1ContigABBBSM000000000
SAMN19945945
NYVetLIRN-306
GCA_018072265.1ContigABACVY000000000
SAMN18789273
NYVetLIRN-266
GCA_018072225.1ContigABACVU000000000
SAMN18789271
NYVetLIRN-264
GCA_018072205.1ContigABACVV000000000
SAMN18789270
NYVetLIRN-263
GCA_018072185.1ContigABACVX000000000
SAMN18789268
NYVetLIRN-261
GCA_018072165.1ContigABACVW000000000
SAMN18789269
NYVetLIRN-262
GCA_018072145.1ContigABACVT000000000
SAMN18789267
NYVetLIRN-260
GCA_018072245.1ContigABACVZ000000000
SAMN18789272
NYVetLIRN-265
GCA_021830105.1ContigABEXHK000000000
SAMN25553384
3838-2
GCA_013986595.1ContigAAVBEG000000000
SAMN07719486
NYVet-LIRN-38
GCA_013986155.1ContigAAVBEH000000000
SAMN07719485
NYVet-LIRN-39
GCA_033125385.1ContigABOKLF000000000
SAMN38019462
AG23-0319
GCA_015610065.2ContigAAXJUT000000000
SAMN08720253
VL-FL-7270
GCA_015609765.2ContigAAXJUS000000000
SAMN08885828
NYVetLIRN-65
GCA_015609685.2ContigAAXJUV000000000
SAMN08720256
VL-FL-907
GCA_015609485.2ContigAAXJUQ000000000
SAMN08720254
VL-FL-8538
GCA_015609665.2ContigAAXJUR000000000
SAMN08720251
VL-FL-9633
GCA_015609745.2ContigAAXJUP000000000
SAMN08885782
NYVetLIRN-69
GCA_015609705.2ContigAAXJUU000000000
SAMN08885940
NYVetLIRN-70
GCA_023289285.1ContigABGBPT000000000
SAMN08720257
VL-FL-915
GCA_023288725.1ContigABGBOR000000000
SAMN08885834
NYVetLIRN-66
GCA_023288785.1ContigABGBOT000000000
SAMN08720250
VL-FL-9607
GCA_023288765.1ContigABGBOS000000000
SAMN08720252
VL-FL-2187
GCA_037060335.1ContigABQPFO000000000
SAMN40264048
800-458-02
GCA_015609445.1ContigAAXJUM000000000
SAMN08885784
NYVetLIRN-68
GCA_015609405.1ContigAAXJUC000000000
SAMN09698691
NYVetLIRN-82
GCA_015609385.1ContigAAXJUE000000000
SAMN09698690
NYVetLIRN-83
GCA_015609365.1ContigAAXJUF000000000
SAMN09698693
NYVetLIRN-81
GCA_015609325.1ContigAAXJUA000000000
SAMN09698697
NYVetLIRN-80
GCA_015609305.1ContigAAXJTZ000000000
SAMN09698702
NYVetLIRN-75
GCA_015609285.1ContigAAXJTY000000000
SAMN09698698
NYVetLIRN-79
GCA_015604725.1ContigAAXJRR000000000
SAMN11604720
AG19-0188
GCA_015609545.1ContigAAXJUB000000000
SAMN09698701
NYVetLIRN-76
GCA_015609475.1ContigAAXJUD000000000
SAMN09698699
NYVetLIRN-78
GCA_015609465.1ContigAAXJTX000000000
SAMN09698700
NYVetLIRN-77
GCA_017108645.1ContigAAZBZN000000000
SAMN17814032
SPSE-18-VL-LA-KY-0008
GCA_017113265.1ContigAAZCHW000000000
SAMN17814061
SPSE-18-VL-LA-TX-0010
GCA_017113245.1ContigAAZCHV000000000
SAMN17814060
SPSE-18-VL-LA-TX-0009
GCA_017112465.1ContigAAZCGK000000000
SAMN17814057
SPSE-18-VL-LA-TX-0005
GCA_017115945.1ContigAAZCIL000000000
SAMN17814073
SPSE-18-VL-LA-TX-0031
GCA_017115885.1ContigAAZCIK000000000
SAMN17814063
SPSE-18-VL-LA-TX-0012
GCA_017118205.1ContigAAZCJK000000000
SAMN17814072
SPSE-18-VL-LA-TX-0029
GCA_017113885.1ContigAAZCHZ000000000
SAMN17814071
SPSE-18-VL-LA-TX-0027
GCA_017113855.1ContigAAZCIB000000000
SAMN17814070
SPSE-18-VL-LA-TX-0025
GCA_017113765.1ContigAAZCIC000000000
SAMN17814069
SPSE-18-VL-LA-TX-0023
GCA_017113735.1ContigAAZCIE000000000
SAMN17814065
SPSE-18-VL-LA-TX-0014
GCA_017113705.1ContigAAZCIF000000000
SAMN17814067
SPSE-18-VL-LA-TX-0019
GCA_017113685.1ContigAAZCIG000000000
SAMN17814068
SPSE-18-VL-LA-TX-0020
GCA_017113655.1ContigAAZCIH000000000
SAMN17814066
SPSE-18-VL-LA-TX-0018
GCA_017113595.1ContigAAZCID000000000
SAMN17814064
SPSE-18-VL-LA-TX-0013
GCA_017113545.1ContigAAZCHR000000000
SAMN17814058
SPSE-18-VL-LA-TX-0007
GCA_017113525.1ContigAAZCHX000000000
SAMN17814059
SPSE-18-VL-LA-TX-0008
GCA_017112425.1ContigAAZCGN000000000
SAMN17814056
SPSE-18-VL-LA-TX-0003
GCA_017115815.1ContigAAZCII000000000
SAMN17814062
SPSE-18-VL-LA-TX-0011
GCA_017110925.1ContigAAZCDM000000000
SAMN17814055
SPSE-18-VL-LA-TX-0002
GCA_017109445.1ContigAAZCAS000000000
SAMN17814053
SPSE-18-VL-LA-KY-0043
GCA_017109265.1ContigAAZCAK000000000
SAMN17814054
SPSE-18-VL-LA-KY-0044
GCA_017109245.1ContigAAZCAB000000000
SAMN17814052
SPSE-18-VL-LA-KY-0042
GCA_017109225.1ContigAAZCAA000000000
SAMN17814051
SPSE-18-VL-LA-KY-0041
GCA_017109205.1ContigAAZBZZ000000000
SAMN17814050
SPSE-18-VL-LA-KY-0040
GCA_017109185.1ContigAAZCAD000000000
SAMN17814047
SPSE-18-VL-LA-KY-0030
GCA_017109145.1ContigAAZCAC000000000
SAMN17814048
SPSE-18-VL-LA-KY-0038
GCA_017109165.1ContigAAZCAG000000000
SAMN17814049
SPSE-18-VL-LA-KY-0039
GCA_017109125.1ContigAAZCAF000000000
SAMN17814046
SPSE-18-VL-LA-KY-0029
GCA_017109105.1ContigAAZCAH000000000
SAMN17814045
SPSE-18-VL-LA-KY-0028
GCA_017109085.1ContigAAZCAE000000000
SAMN17814044
SPSE-18-VL-LA-KY-0027
GCA_017109045.1ContigAAZBZV000000000
SAMN17814038
SPSE-18-VL-LA-KY-0017
GCA_017108965.1ContigAAZBZW000000000
SAMN17814030
SPSE-18-VL-LA-KY-0005
GCA_017108975.1ContigAAZBZY000000000
SAMN17814028
SPSE-18-VL-LA-KY-0002
GCA_017108945.1ContigAAZBZU000000000
SAMN17814040
SPSE-18-VL-LA-KY-0021
GCA_017108925.1ContigAAZBZR000000000
SAMN17814041
SPSE-18-VL-LA-KY-0023
GCA_017108905.1ContigAAZBZS000000000
SAMN17814039
SPSE-18-VL-LA-KY-0018
GCA_017108885.1ContigAAZBZK000000000
SAMN17814036
SPSE-18-VL-LA-KY-0012
GCA_017108865.1ContigAAZBZI000000000
SAMN17814037
SPSE-18-VL-LA-KY-0014
GCA_017108845.1ContigAAZBZJ000000000
SAMN17814035
SPSE-18-VL-LA-KY-0011
GCA_017108825.1ContigAAZBZO000000000
SAMN17814031
SPSE-18-VL-LA-KY-0007
GCA_017108805.1ContigAAZBZT000000000
SAMN17814034
SPSE-18-VL-LA-KY-0010
GCA_017108785.1ContigAAZBZL000000000
SAMN17814033
SPSE-18-VL-LA-KY-0009
GCA_018023995.1ContigABABPF000000000
SAMN17814043
SPSE-18-VL-LA-KY-0026
GCA_029771065.1ContigABLOMX000000000
SAMN17180230
OTH-20-VL-WA-MO-0002
GCA_017933695.1ContigAAZZPW000000000
SAMN17384253
AG21-0284
SRA Data Details
ParameterValue
Data volume, Gbases561
Data volume, Tbytes0.31

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