ID 658263 - BioProject

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Accession: PRJNA658263 ID: 658263

Whole genome sequencing of porcine fecal anaerobes Genome sequencing and assembly

In this study we cultured and sequenced bacterial isolates from porcine feces samples.

Accession	PRJNA658263
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 20-Aug-2020 Veterinary Research Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	65
SRA Experiments	65
Other datasets
BioSample	65
Assembly	65

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

65
65

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_021531255.1	JAFBIO000000000	SAMN15872567	An912	Allofournierella massiliensis
GCA_021531715.1	JAFBIT000000000	SAMN15872544	An867	Anaeromassilibacillus senegalensis
GCA_021531495.1	JADYTY000000000	SAMN15872556	An883	Anaerovibrio lipolyticus
GCA_021532125.1	JADYUX000000000	SAMN15872579	ET43	Arcanobacterium haemolyticum
GCA_021532245.1	JADYVB000000000	SAMN15872602	ET22	Bacteroides caecigallinarum
GCA_021531075.1	JADYTJ000000000	SAMN15872598	ET12	Bacteroides caecigallinarum
GCA_021531015.1	JADYTG000000000	SAMN15872594	ET19	Bacteroides caecigallinarum
GCA_021530995.1	JADYTF000000000	SAMN15872601	ET21	Bacteroides caecigallinarum
GCA_021532015.1	JADYUS000000000	SAMN15872584	ET48	Bacteroides fragilis
GCA_021532155.1	JADYUW000000000	SAMN15872580	ET44	Bacteroides pyogenes
GCA_021532175.1	JADYUY000000000	SAMN15872578	ET42	Bacteroides thetaiotaomicron
GCA_021531575.1	JADYUC000000000	SAMN15872552	An878	Bacteroides thetaiotaomicron
GCA_021531295.1	JADYTM000000000	SAMN15872573	An931	Bacteroides xylanisolvens
GCA_021531155.1	JADYTP000000000	SAMN15872570	An918	Bifidobacterium boum
GCA_021531235.1	JADYTR000000000	SAMN15872568	An915	Blautia producta
GCA_021531865.1	JAFBIW000000000	SAMN15872593	ET57	Butyricicoccus pullicaecorum
GCA_021532205.1	JADYVA000000000	SAMN15872576	ET40	Clostridioides difficile
GCA_021532025.1	JADYUR000000000	SAMN15872585	ET49	Clostridium perfringens
GCA_021653955.1	JAEAGM000000000	SAMN15872596	ET32	Collinsella tanakaei
GCA_021531055.1	JADYTL000000000	SAMN15872597	ET10	Collinsella tanakaei
GCA_021532095.1	JADYUU000000000	SAMN15872582	ET46	Enterocloster clostridioformis
GCA_021531995.1	JAFBIZ000000000	SAMN15872587	ET51	Faecalicatena contorta
GCA_021531975.1	JAFBIY000000000	SAMN15872588	ET52	Faecalicatena contorta
GCA_021531895.1	JAFBIX000000000	SAMN15872591	ET55	Faecalicatena contorta
GCA_021531105.1	JAFBIN000000000	SAMN15872575	An936	Faecalicatena contorta
GCA_021531635.1	JADYUG000000000	SAMN15872548	An874	Fusobacterium mortiferum
GCA_021532115.1	JADYUV000000000	SAMN15872581	ET45	Fusobacterium mortiferum
GCA_021531595.1	JADYUD000000000	SAMN15872551	An877	Fusobacterium perfoetens
GCA_021531475.1	JADYTX000000000	SAMN15872557	An888	Fusobacterium perfoetens
GCA_021531615.1	JADYUE000000000	SAMN15872550	An876	Fusobacterium varium
GCA_021531855.1	JADYUN000000000	SAMN15921616	K11	Fusobacterium varium
GCA_021531755.1	JADYUK000000000	SAMN15872543	An865	Hoylesella loescheii
GCA_021531795.1	JADYUL000000000	SAMN15872541	An861	Lacrimispora saccharolytica
GCA_021531655.1	JADYUF000000000	SAMN15872549	An875	Leyella stercorea
GCA_021531515.1	JADYTZ000000000	SAMN15872555	An881	Leyella stercorea
GCA_021531355.1	JADYTS000000000	SAMN15872564	An906	Leyella stercorea
GCA_021531215.1	JADYTQ000000000	SAMN15872569	An917	Ligilactobacillus ruminis
GCA_021531535.1	JADYUB000000000	SAMN15872553	An879	Ligilactobacillus salivarius
GCA_021530965.1	JADYTH000000000	SAMN15872600	ET18	Mediterraneibacter glycyrrhizinilyticus
GCA_021532045.1	JADYUQ000000000	SAMN15872586	ET50	Mediterraneibacter gnavus
GCA_021531445.1	JADYTW000000000	SAMN15872559	An892	Mitsuokella multacida
GCA_021531555.1	JADYUA000000000	SAMN15872554	An880	Niallia circulans
GCA_021531435.1	JAFBIS000000000	SAMN15872558	An890	Oscillibacter valericigenes
GCA_021531315.1	JAFBIQ000000000	SAMN15872565	An907	Oscillibacter valericigenes
GCA_021531915.1	JAFBIV000000000	SAMN15872540	An860	Oscillibacter valericigenes
GCA_021531775.1	JAFBIU000000000	SAMN15872542	An863	Parabacteroides distasonis
GCA_021531385.1	JAFBIR000000000	SAMN15872561	An897	Parabacteroides distasonis
GCA_021531035.1	JADYTI000000000	SAMN15872599	ET13	Phocaeicola barnesiae
GCA_021531085.1	JADYTK000000000	SAMN15872595	ET11	Phocaeicola barnesiae
GCA_021531335.1	JADYTT000000000	SAMN15872563	An905	Phocaeicola vulgatus
GCA_021532075.1	JADYUT000000000	SAMN15872583	ET47	Phocaeicola vulgatus
GCA_021531735.1	JADYUJ000000000	SAMN15872545	An868	Prevotella dentalis
GCA_021531665.1	JADYUH000000000	SAMN15872547	An873	Prevotellamassilia timonensis
GCA_021531375.1	JADYTU000000000	SAMN15872562	An901	Pseudoflavonifractor phocaeensis
GCA_021531815.1	JADYUM000000000	SAMN15872539	An858	Pseudoflavonifractor phocaeensis
GCA_021531955.1	JADYUP000000000	SAMN15872589	ET53	Pseudoflavonifractor phocaeensis
GCA_021531695.1	JADYUI000000000	SAMN15872546	An869	Roseburia hominis
GCA_021532195.1	JADYUZ000000000	SAMN15872577	ET41	Schaalia hyovaginalis
GCA_021531415.1	JADYTV000000000	SAMN15872560	An893	Segatella copri
GCA_021531135.1	JAFBJP000000000	SAMN15872574	An935	Segatella hominis
GCA_021531925.1	JADYVC000000000	SAMN15872590	ET54	Streptococcus alactolyticus
GCA_021531835.1	JADYUO000000000	SAMN15872592	ET56	Streptococcus alactolyticus
GCA_021531275.1	JAFBIP000000000	SAMN15872566	An908	Streptococcus pasteurianus
GCA_021531175.1	JADYTN000000000	SAMN15872572	An925	Xylanibacter brevis
GCA_021531195.1	JADYTO000000000	SAMN15872571	An923	Xylanibacter brevis

SRA Data Details

Parameter	Value
Data volume, Gbases	56
Data volume, Mbytes	24873

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Whole genome sequencing of porcine fecal anaerobes Genome sequencing and assembly

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