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Links from Nucleotide

Accession: PRJNA577380 ID: 577380

Eutrema salsugineum isolate:Shandong2018

De novo assembly of salt cress (Eutrema salsugineum) genome with Nanopore long reads and Hi-C

See Genome Information for Eutrema salsugineum
To generate a chromosome-level assembly for the salt cress genome, we used long reads generated by Oxford Nanopore sequencing and performed Hi-C experiment to scaffold the assembled contigs.
AccessionPRJNA577380
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEutrema salsugineum[Taxonomy ID: 72664]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum
SubmissionRegistration date: 12-Jan-2021
Sichuan University
Locus Tag PrefixGBQ76
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8
WGS master1
SRA Experiments3
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases78
Data volume, Mbytes36139

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