bioreactor metagenome (ID 692125) - BioProject

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Accession: PRJDB10895 ID: 692125

bioreactor metagenome

Metagenomic analysis of bacteria in a long-term freshwater anammox column reactor

We predicted the metabolic potential of coexisting bacteria in a freshwater anammox enrichment culture, which was operated for more than 15 years, fed with ammonia as the sole energy source, and lacked an external organic carbon supply. More...

Accession	PRJDB10895
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	bioreactor metagenome[Taxonomy ID: 1076179] unclassified sequences; metagenomes; ecological metagenomes; bioreactor metagenome
Publications	Published online: Hosokawa S et al., "Cometabolism of the Superphylum Patescibacteria with Anammox Bacteria in a Long-Term Freshwater Anammox Column Reactor", Water, 2021;13(2)
Submission	Registration date: 13-Jan-2021 Environmental Preservation Engineering, Civil and Environmental Engineering, Hiroshima University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1922
WGS master	37
SRA Experiments	4
Protein Sequences	105123
Other datasets
BioSample	40
Assembly	37

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

37
37

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_016861045.1	BOKP00000000	SAMD00270024	BroJett022	Actinomycetes bacterium
GCA_016861165.1	BOKV00000000	SAMD00270030	BroJett030	Alphaproteobacteria bacterium
GCA_016861145.1	BOKU00000000	SAMD00270029	BroJett029	Alphaproteobacteria bacterium
GCA_016860885.1	BOKH00000000	SAMD00270016	BroJett013	Alphaproteobacteria bacterium
GCA_016861065.1	BOKQ00000000	SAMD00270025	BroJett024	Alphaproteobacteria bacterium
GCA_016860805.1	BOKD00000000	SAMD00270012	BroJett009	Armatimonadota bacterium
GCA_016861005.1	BOKN00000000	SAMD00270022	BroJett020	Bacteroidota bacterium
GCA_016861405.1	BOLF00000000	SAMD00270040	BroJett042	Bacteroidota bacterium
GCA_016861105.1	BOKS00000000	SAMD00270027	BroJett026	Betaproteobacteria bacterium
GCA_016861185.1	BOKW00000000	SAMD00270031	BroJett031	Betaproteobacteria bacterium
GCA_016860865.1	BOKG00000000	SAMD00270015	BroJett012	Betaproteobacteria bacterium
GCA_016860745.1	BOKA00000000	SAMD00270009	BroJett006	Betaproteobacteria bacterium
GCA_016860665.1	BOJW00000000	SAMD00270005	BroJett002	Candidatus Brocadia sinica
GCA_016861385.1	BOLE00000000	SAMD00270039	BroJett041	Candidatus Jettenia caeni
GCA_016861325.1	BOLC00000000	SAMD00270037	BroJett039	Chloroflexota bacterium
GCA_016861305.1	BOLB00000000	SAMD00270036	BroJett038	Chloroflexota bacterium
GCA_016861225.1	BOKY00000000	SAMD00270033	BroJett033	Chloroflexota bacterium
GCA_016860645.1	BOJV00000000	SAMD00270004	BroJett001	Chloroflexota bacterium
GCA_016860845.1	BOKF00000000	SAMD00270014	BroJett011	Chloroflexota bacterium
GCA_016860765.1	BOKB00000000	SAMD00270010	BroJett007	Chloroflexota bacterium
GCA_016861025.1	BOKO00000000	SAMD00270023	BroJett021	Chloroflexota bacterium
GCA_016860965.1	BOKL00000000	SAMD00270020	BroJett018	Chloroflexota bacterium
GCA_016860925.1	BOKJ00000000	SAMD00270018	BroJett015	Chloroflexota bacterium
GCA_016861125.1	BOKT00000000	SAMD00270028	BroJett028	Deltaproteobacteria bacterium
GCA_016860825.1	BOKE00000000	SAMD00270013	BroJett010	Gammaproteobacteria bacterium
GCA_016860945.1	BOKK00000000	SAMD00270019	BroJett017	Ignavibacteriota bacterium
GCA_016860725.1	BOJZ00000000	SAMD00270008	BroJett005	Ignavibacteriota bacterium
GCA_016861345.1	BOLD00000000	SAMD00270038	BroJett040	Oligoflexia bacterium
GCA_016861265.1	BOLA00000000	SAMD00270035	BroJett037	Patescibacteria group bacterium
GCA_016861245.1	BOKZ00000000	SAMD00270034	BroJett034	Patescibacteria group bacterium
GCA_016861085.1	BOKR00000000	SAMD00270026	BroJett025	Patescibacteria group bacterium
GCA_016861205.1	BOKX00000000	SAMD00270032	BroJett032	Patescibacteria group bacterium
GCA_016860985.1	BOKM00000000	SAMD00270021	BroJett019	Patescibacteria group bacterium
GCA_016860785.1	BOKC00000000	SAMD00270011	BroJett008	Patescibacteria group bacterium
GCA_016860905.1	BOKI00000000	SAMD00270017	BroJett014	Planctomycetota bacterium
GCA_016860705.1	BOJY00000000	SAMD00270007	BroJett004	Planctomycetota bacterium
GCA_016860685.1	BOJX00000000	SAMD00270006	BroJett003	Planctomycetota bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	125
Data volume, Mbytes	53351

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bioreactor metagenome

Metagenomic analysis of bacteria in a long-term freshwater anammox column reactor

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