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Accession: PRJNA556880 ID: 556880

Etheostoma spectabile (orangethroat darter)

Etheostoma spectabile Genome sequencing and assembly

See Genome Information for Etheostoma spectabile
To investigate the genomic architecture of reproductive isolation in darters, we used Illumina and PacBio sequencing to generate a chromosome-level, annotated assembly of the orangethroat darter (Etheostoma spectabile) genome.
AccessionPRJNA556880
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEtheostoma spectabile[Taxonomy ID: 54343]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma; Etheostoma spectabile
Grants
  • "DISSERTATION RESEARCH: Examining the role of reinforcement in driving genomic divergence between and within species in darters" (Grant ID IOS 1701676, National Science Foundation)
SubmissionRegistration date: 24-Sep-2019
University of Illinois at Urbana-Champaign
RelevanceEvolution
Locus Tag PrefixFQN60
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)924
WGS master1
TSA master1
SRA Experiments154
Protein Sequences18816
Other datasets
BioSample149
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases240
Data volume, Tbytes0.12
Related RefSeq Project
PRJNA606051 : Etheostoma spectabile RefSeq Genome sequencing

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