Calypte anna (ID 558503) - BioProject

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Accession: PRJNA558503 ID: 558503

Calypte anna (Anna's hummingbird)

Calypte anna RefSeq Genome sequencing and assembly

See Genome Information for Calypte anna

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This project is a component of the Calypte anna (Anna's hummingbird) genome assembly, bCalAnn1

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7 additional projects are related by organism.

2 additional projects are components of the Calypte anna (Anna's hummingbird) genome assembly, bCalAnn1.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA489139). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA558503
Data Type	RefSeq Genome sequencing and assembly
Scope	Monoisolate
Organism	Calypte anna[Taxonomy ID: 9244] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte; Calypte anna
Publications (total 7) Less...	Korlach J et al., "De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.", Gigascience, 2017 Oct 1;6(10):1-16 More... Korlach J et al., "De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.", Gigascience, 2017 Oct 1;6(10):1-16 Zhang G et al., "Genomics: Bird sequencing project takes off.", Nature, 2015 Jun 4;522(7554):34 Koepfli KP et al., "The Genome 10K Project: a way forward.", Annu Rev Anim Biosci, 2015;3:57-111 Jarvis ED et al., "Phylogenomic analyses data of the avian phylogenomics project.", Gigascience, 2015;4:4 Zhang G et al., "Comparative genomics reveals insights into avian genome evolution and adaptation.", Science, 2014 Dec 12;346(6215):1311-20 Jarvis ED et al., "Whole-genome analyses resolve early branches in the tree of life of modern birds.", Science, 2014 Dec 12;346(6215):1320-31 Zhang G et al., "Comparative genomic data of the Avian Phylogenomics Project.", Gigascience, 2014;3(1):26 Less...
Submission	Registration date: 20-Dec-2018 Vertebrate Genomes Project - G10K - Vertebrate Genomes Lab - Pacific Biosciences - 10X Genomics - Arima Genomics
Related Resources	G10K Consortium Vertebrate Genomes Project Bird B10K Project
Relevance	Model Organism
Locus Tag Prefix	FSO82

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	31283
Transcript	31091
Protein Sequences	29214
Publications
PubMed	7
PMC	6
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_003957555.1	Chromosome	RRCD00000000	33	SAMN02265252	Calypte anna

Related GenBank Project

PRJNA489139 : Calypte anna (Anna's hummingbird) genome sequencing and assembly, primary haplotype, v1

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Calypte anna (Anna's hummingbird)

Calypte anna RefSeq Genome sequencing and assembly

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