Aureobasidium pullulans (ID 488010) - BioProject

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Accession: PRJNA488010 ID: 488010

Aureobasidium pullulans

Aureobasidium pullulans Genome sequencing and assembly of 50 environmental strains

See Genome Information for Aureobasidium pullulans

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36 additional projects are related by organism.

Aureobasidium pullulans is a ubiquitous polyextremotolerant black yeast. Fifty environmental isolates were genome sequenced to investigate the population structure and evidence for recombination in the species and to facilitate future use of new strains of this biotechnologically important yeast.

Accession	PRJNA488010
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Aureobasidium pullulans[Taxonomy ID: 5580] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Dothideales; Saccotheciaceae; Aureobasidium; Aureobasidium pullulans
Publications	Gostinčar C et al., "Fifty Aureobasidium pullulans genomes reveal a recombining polyextremotolerant generalist.", Environ Microbiol, 2019 Oct;21(10):3638-3652
Grants	"IC MYCOSMO" (Grant ID I0-0022 MRIC UL, Slovenian Research and Innovation Agency)
Submission	Registration date: 26-Apr-2019 Biotechnical Faculty, University of Ljubljana
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	65925
WGS master	49
SRA Experiments	53
Protein Sequences	514514
Publications
PubMed	1
PMC	1
Other datasets
BioSample	54
Assembly	49

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

49
49

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004918535.1	QZBU00000000	SAMN10031581	EXF-3380	Aureobasidium pullulans
GCA_004917115.1	QZAI00000000	SAMN10031623	EXF-11319	Aureobasidium pullulans
GCA_004918575.1	QZBY00000000	SAMN10031577	EXF-1668	Aureobasidium pullulans
GCA_004918505.1	QZCB00000000	SAMN10031574	EXF-674	Aureobasidium pullulans
GCA_004918215.1	QZBP00000000	SAMN10031586	EXF-3750	Aureobasidium pullulans
GCA_004917225.1	QZAH00000000	SAMN10031624	EXF-11323	Aureobasidium pullulans
GCA_004918275.1	QZBR00000000	SAMN10031584	EXF-3645	Aureobasidium pullulans
GCA_004918245.1	QZBX00000000	SAMN10031578	EXF-2618	Aureobasidium pullulans
GCA_004918195.1	QZCA00000000	SAMN10031575	EXF-676	Aureobasidium pullulans
GCA_004918165.1	QZBW00000000	SAMN10031579	EXF-3358	Aureobasidium pullulans
GCA_004918145.1	QZBV00000000	SAMN10031580	EXF-3374	Aureobasidium pullulans
GCA_004917685.1	QZBI00000000	SAMN10031593	EXF-5628	Aureobasidium pullulans
GCA_004917745.1	QZBN00000000	SAMN10031588	EXF-3844	Aureobasidium pullulans
GCA_004917705.1	QZBK00000000	SAMN10031591	EXF-4010	Aureobasidium pullulans
GCA_004917155.1	QZAG00000000	SAMN10031625	EXF-11825	Aureobasidium pullulans
GCA_004917755.1	QZBO00000000	SAMN10031587	EXF-3780	Aureobasidium pullulans
GCA_004917725.1	QZBM00000000	SAMN10031589	EXF-3863	Aureobasidium pullulans
GCA_004917595.1	QZAQ00000000	SAMN10031615	EXF-10629	Aureobasidium pullulans
GCA_004917605.1	QZAU00000000	SAMN10031609	EXF-10080	Aureobasidium pullulans
GCA_004917665.1	QZBH00000000	SAMN10031595	EXF-6267	Aureobasidium pullulans
GCA_004917145.1	QZAE00000000	SAMN10031627	EXF-11991	Aureobasidium pullulans
GCA_004917625.1	QZBC00000000	SAMN10031600	EXF-8126	Aureobasidium pullulans
GCA_004917505.1	QZBF00000000	SAMN10031597	EXF-6514	Aureobasidium pullulans
GCA_004917615.1	QZAY00000000	SAMN10031604	EXF-8841	Aureobasidium pullulans
GCA_004917525.1	QZBG00000000	SAMN10031596	EXF-6298	Aureobasidium pullulans
GCA_004917415.1	QZAX00000000	SAMN10031606	EXF-9399	Aureobasidium pullulans
GCA_004917555.1	QZBJ00000000	SAMN10031592	EXF-4256	Aureobasidium pullulans
GCA_004917485.1	QZBD00000000	SAMN10031599	EXF-6604	Aureobasidium pullulans
GCA_004917495.1	QZBE00000000	SAMN10031598	EXF-6519	Aureobasidium pullulans
GCA_004917105.1	QZAF00000000	SAMN10031626	EXF-11900	Aureobasidium pullulans
GCA_004917435.1	QZBA00000000	SAMN10031602	EXF-8128	Aureobasidium pullulans
GCA_004917445.1	QZBB00000000	SAMN10031601	EXF-8127	Aureobasidium pullulans
GCA_004917425.1	QZAZ00000000	SAMN10031603	EXF-8828	Aureobasidium pullulans
GCA_004917385.1	QZAV00000000	SAMN10031608	EXF-9785	Aureobasidium pullulans
GCA_004917375.1	QZAT00000000	SAMN10031610	EXF-10081	Aureobasidium pullulans
GCA_004917355.1	QZAS00000000	SAMN10031611	EXF-10085	Aureobasidium pullulans
GCA_004917335.1	QZAR00000000	SAMN10031613	EXF-10507	Aureobasidium pullulans
GCA_004917305.1	QZAP00000000	SAMN10031616	EXF-10632	Aureobasidium pullulans
GCA_004917135.1	QZAJ00000000	SAMN10031622	EXF-11318	Aureobasidium pullulans
GCA_004917275.1	QZAO00000000	SAMN10031617	EXF-10659	Aureobasidium pullulans
GCA_004917255.1	QZAM00000000	SAMN10031619	EXF-10796	Aureobasidium pullulans
GCA_004917205.1	QZAN00000000	SAMN10031618	EXF-10751	Aureobasidium pullulans
GCA_004917185.1	QZAL00000000	SAMN10031620	EXF-11013	Aureobasidium pullulans
GCA_004917165.1	QZAK00000000	SAMN10031621	EXF-11014	Aureobasidium pullulans
GCA_004918105.1	QZBS00000000	SAMN10031583	EXF-3519	Aureobasidium pullulans
GCA_004918115.1	QZBT00000000	SAMN10031582	EXF-3403	Aureobasidium pullulans
GCA_004917795.1	QZBL00000000	SAMN10031590	EXF-3984	Aureobasidium pullulans
GCA_004917825.1	QZBZ00000000	SAMN10031576	EXF-1645	Aureobasidium pullulans
GCA_004917815.1	QZBQ00000000	SAMN10031585	EXF-3670	Aureobasidium pullulans

SRA Data Details

Parameter	Value
Data volume, Gbases	105
Data volume, Mbytes	46543

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Aureobasidium pullulans

Aureobasidium pullulans Genome sequencing and assembly of 50 environmental strains

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