marine sediment metagenome (ID 504765) - BioProject

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Accession: PRJNA504765 ID: 504765

marine sediment metagenome

marine sediment metagenome Metagenomic assembly

Metagenome of marine sediment near Loki's castle

Accession	PRJNA504765
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Publications	Bäckström D et al., "Virus Genomes from Deep Sea Sediments Expand the Ocean Megavirome and Support Independent Origins of Viral Gigantism.", mBio, 2019 Mar 5;10(2)
Grants	"VR grant" (Grant ID 2015-04959, Swedish Research Council) "Future research leaders" (Grant ID SSF-FFL-5, Swedish Foundation for Strategic Research) "ERC Starting Grant" (Grant ID 310039-PUZZLE_CELL, European Research Council)
Submission	Registration date: 15-Feb-2019 Uppsala University
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	364
WGS master	28
Genomic DNA	336
SRA Experiments	34
Protein Sequences	9568
Publications
PubMed	1
PMC	1
Other datasets
BioSample	54
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

28
28

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_011065265.1	JAAKFA000000000	SAMN13933076	K1000_chlam_1	Candidatus Anoxychlamydiales bacterium
GCA_011065115.1	JAAKFG000000000	SAMN13933082	K1060_chlam_3	Candidatus Anoxychlamydiales bacterium
GCA_011065105.1	JAAKFH000000000	SAMN13933083	K1060_chlam_4	Candidatus Anoxychlamydiales bacterium
GCA_011065125.1	JAAKFI000000000	SAMN13933084	K1060_chlam_5	Candidatus Anoxychlamydiales bacterium
GCA_011065175.1	JAAKFE000000000	SAMN13933080	K1060_chlam_1	Candidatus Anoxychlamydiales bacterium
GCA_011065045.1	JAAKFN000000000	SAMN13933089	K940_chlam_5	Candidatus Anoxychlamydiales bacterium
GCA_011065025.1	JAAKFM000000000	SAMN13933088	K940_chlam_4	Candidatus Anoxychlamydiales bacterium
GCA_011064905.1	JAAKFW000000000	SAMN13933098	KR126_chlam_5	Candidatus Anoxychlamydiales bacterium
GCA_011064865.1	JAAKFX000000000	SAMN13933099	KR126_chlam_6	Candidatus Anoxychlamydiales bacterium
GCA_011064875.1	JAAKFV000000000	SAMN13933097	KR126_chlam_4	Candidatus Anoxychlamydiales bacterium
GCA_011064745.1	JAAKFJ000000000	SAMN13933085	K940_chlam_1	Candidatus Anoxychlamydiales bacterium
GCA_011064725.1	JAAKFQ000000000	SAMN13933092	K940_chlam_8	Chlamydiota bacterium
GCA_011065005.1	JAAKFP000000000	SAMN13933091	K940_chlam_7	Chlamydiota bacterium
GCA_011064985.1	JAAKFR000000000	SAMN13933093	K940_chlam_9	Chlamydiota bacterium
GCA_011064965.1	JAAKFS000000000	SAMN13933094	KR126_chlam_1	Chlamydiota bacterium
GCA_011064935.1	JAAKFT000000000	SAMN13933095	KR126_chlam_2	Chlamydiota bacterium
GCA_011064915.1	JAAKFU000000000	SAMN13933096	KR126_chlam_3	Chlamydiota bacterium
GCA_011065165.1	JAAKFF000000000	SAMN13933081	K1060_chlam_2	Chlamydiota bacterium
GCA_011064755.1	JAAKFO000000000	SAMN13933090	K940_chlam_6	Chlamydiota bacterium
GCA_011065075.1	JAAKFK000000000	SAMN13933086	K940_chlam_2	Chlamydiota bacterium
GCA_011065065.1	JAAKFL000000000	SAMN13933087	K940_chlam_3	Chlamydiota bacterium
GCA_011065235.1	JAAKFB000000000	SAMN13933077	K1000_chlam_2	Chlamydiota bacterium
GCA_011065225.1	JAAKFC000000000	SAMN13933078	K1000_chlam_3	Chlamydiota bacterium
GCA_011065205.1	JAAKFD000000000	SAMN13933079	K1000_chlam_4	Chlamydiota bacterium
GCA_004196315.1	SDBT00000000	SAMN10404973	-	marine sediment metagenome
GCA_004196295.1	SDBS00000000	SAMN10404972	-	marine sediment metagenome
GCA_004196275.1	SDBV00000000	SAMN10402039	-	marine sediment metagenome
GCA_004196255.1	SDBU00000000	SAMN10397929	-	marine sediment metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	248
Data volume, Tbytes	0.16

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marine sediment metagenome

marine sediment metagenome Metagenomic assembly

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