freshwater metagenome (ID 498307) - BioProject

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Accession: PRJNA498307 ID: 498307

freshwater metagenome

Consortium of cyanobacterium and proteobacterium

Here we present a sequences of symbiotic consortium consisted of one cyanobacterium and one proteobacterium.

Accession	PRJNA498307
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	freshwater metagenome[Taxonomy ID: 449393] unclassified sequences; metagenomes; ecological metagenomes; freshwater metagenome
Grants	"Ecophysilogical and biochemical characterization of strains of the Collection of cyanobacteria and microalgae IPPAS perspective for the production of valuable compounds" (Grant ID 14-14-00904, Russian Science Foundation)
Submission	Registration date: 13-Nov-2018 Institute of Plant Physiology, Russian Academy of Sciences
Related Resources	Laboratory of Cell Regulation, IPPAS
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	198
WGS master	2
SRA Experiments	2
Protein Sequences	9922
Other datasets
BioSample	3
Assembly	2

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

2
2

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_003724315.1		RHGL00000000	SAMN10288855	IPPAS B-1204	Leptolyngbya sp. IPPAS B-1204
GCA_003724185.1		RHGM00000000	SAMN10288856	IPPAS B-1204	Porphyrobacter sp. IPPAS B-1204

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	702

Supplemental Content

Related information

Assembly
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BioSample
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Genome
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Nucleotide
Related Nucleotide entry
Protein
Related Proteins
SRA
All related SRA Experiments
Taxonomy
Taxonomy Links
WGS master
Link to WGS master record(s)

Related Resources

Laboratory of Cell Regulation, IPPAS
Laboratory of Cell Regulation, IPPAS

LinkOut to external resources

SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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freshwater metagenome
freshwater metagenome
Consortium of cyanobacterium and proteobacterium

BioProject
BioProject Links for Nucleotide (Select 1512062217) (1)
BioProject
MIMAT0014984 AND (alive[prop]) (0)
Gene
MAG: Porphyrobacter sp. IPPAS B-1204 Mongol_c5, whole genome shotgun sequence
MAG: Porphyrobacter sp. IPPAS B-1204 Mongol_c5, whole genome shotgun sequence
gi|1512062217|gb|RHGM01000001.1||gn :RHGM01|Mongol_c5

Nucleotide

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