Pectobacterium spp, Dickeya dianthicola (ID 490624) - BioProject

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Accession: PRJNA490624 ID: 490624

Pectobacterium spp, Dickeya dianthicola

Genomic diversity of the pathogens belonging to Pectobacterium and Dickeya genus isoalted from potato in Morocoo

Genomic analyses of the pathogen causing Blackleg of Potato in Morocco was done to find out the diversity among the pathogens for developing better management strategies like bio-control and precautionary measures.

Accession	PRJNA490624
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 13-Sep-2018 Institute for integrative biology of the cell

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	888
WGS master	10
Protein Sequences	42724
Other datasets
BioSample	10
Assembly	10

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

10
10

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003595075.1	QZDN00000000	SAMN10059731	S4.16.03.P2.4	Dickeya dianthicola
GCA_003595005.1	QZDO00000000	SAMN10059730	S4.16.03.LID	Dickeya dianthicola
GCA_003594975.1	QZDI00000000	SAMN10059736	S4.16.03.1C	Pectobacterium carotovorum
GCA_003595055.1	QZDH00000000	SAMN10059737	S1.15.11.2D	Pectobacterium carotovorum
GCA_003595125.1	QZDJ00000000	SAMN10059735	S1-A16	Pectobacterium carotovorum
GCA_003595115.1	QZDG00000000	SAMN10059738	S1.16.01.3K	Pectobacterium carotovorum
GCA_003595035.1	QZDF00000000	SAMN10059739	S4.16.03.2B	Pectobacterium polaris
GCA_003595065.1	QZDK00000000	SAMN10059734	S4.16.03.3I	Pectobacterium versatile
GCA_003594995.1	QZDM00000000	SAMN10059732	S4.16.03.3F	Pectobacterium versatile
GCA_003595135.1	QZDL00000000	SAMN10059733	S4.16.03.3K	Pectobacterium versatile

Supplemental Content

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Genome
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Nucleotide
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Protein
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WGS master
Link to WGS master record(s)

LinkOut to external resources

2858456737: Pectobacterium carotovorum S1.15.11.2D [Integrated Microbial Genomes]
2858456737: Pectobacterium carotovorum S1.15.11.2D
Integrated Microbial Genomes
2855163193: Pectobacterium carotovorum S4.16.03.1C [Integrated Microbial Genomes]
2855163193: Pectobacterium carotovorum S4.16.03.1C
Integrated Microbial Genomes
2858447683: Pectobacterium carotovorum S4.16.03.3F [Integrated Microbial Genomes]
2858447683: Pectobacterium carotovorum S4.16.03.3F
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Pectobacterium spp, Dickeya dianthicola
Pectobacterium spp, Dickeya dianthicola
Genomic diversity of the pathogens belonging to Pectobacterium and Dickeya genus isoalted from potato in Morocoo

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