bioreactor sludge metagenome (ID 450161) - BioProject

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Accession: PRJNA450161 ID: 450161

bioreactor sludge metagenome

bioreactor sludge metagenome Genome sequencing and assembly

Understanding the succession model of microbial community and shift of the microbial cross-feeding interactions between anammox and microorganisms affiliated to other phylum during the anammox reactor start-up.

Accession	PRJNA450161
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	bioreactor sludge metagenome[Taxonomy ID: 412754] unclassified sequences; metagenomes; ecological metagenomes; bioreactor sludge metagenome
Publications	Zhao Y et al., "Genome-Centered Metagenomics Analysis Reveals the Symbiotic Organisms Possessing Ability to Cross-Feed with Anammox Bacteria in Anammox Consortia.", Environ Sci Technol, 2018 Oct 2;52(19):11285-11296
Submission	Registration date: 19-Sep-2018 Peking University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	9636
WGS master	37
SRA Experiments	5
Protein Sequences	124373
Publications
PubMed	1
Other datasets
BioSample	43
Assembly	37

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

20
17
37

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_003577445.1	QEUL00000000	SAMN08931094	ACD1	Acidobacteriota bacterium
GCA_003577175.1	QEUO00000000	SAMN08931110	ATN1	Acidobacteriota bacterium
GCA_003577145.1	QEUP00000000	SAMN08931111	ATN2	Acidobacteriota bacterium
GCA_003577095.1	QEUR00000000	SAMN08931114	ATN4	Acidobacteriota bacterium
GCA_003577105.1	QEUQ00000000	SAMN08931112	ATN3	Acidobacteriota bacterium
GCA_003577455.1	QEUS00000000	SAMN08931181	CFX1	Anaerolineae bacterium
GCA_003577395.1	QEUX00000000	SAMN08931186	CFX6	Anaerolineae bacterium
GCA_003577035.1	QEUV00000000	SAMN08931184	CFX4	Anaerolineae bacterium
GCA_003577165.1	QEUM00000000	SAMN08931108	ATM1	Armatimonadota bacterium
GCA_003577425.1	QEUN00000000	SAMN08931109	ATM2	Armatimonadota bacterium
GCA_003576795.1	QEVN00000000	SAMN08931222	PRO4	Burkholderiales bacterium
GCA_003577305.1	QEVL00000000	SAMN08931220	PRO2	Burkholderiales bacterium
GCA_003577195.1	QEUK00000000	SAMN08931091	AMX2	Candidatus Brocadia sp.
GCA_003577215.1	QEUJ00000000	SAMN08929334	AMX1	Candidatus Brocadia sp.
GCA_003576945.1	QEVC00000000	SAMN08931211	GWF	Candidatus Microgenomates bacterium
GCA_003576745.1	QEVR00000000	SAMN08931227	UCB1	Candidatus Uhrbacteria bacterium
GCA_003577065.1	QEUU00000000	SAMN08931183	CFX3	Chloroflexota bacterium
GCA_003577085.1	QEUT00000000	SAMN08931182	CFX2	Chloroflexota bacterium
GCA_003577345.1	QEVA00000000	SAMN08931189	CFX9	Chloroflexota bacterium
GCA_003577005.1	QEUW00000000	SAMN08931185	CFX5	Chloroflexota bacterium
GCA_003577355.1	QEUZ00000000	SAMN08931188	CFX8	Chloroflexota bacterium
GCA_003577365.1	QEUY00000000	SAMN08931187	CFX7	Chloroflexota bacterium
GCA_003577315.1	QEVK00000000	SAMN08931219	PRO1	Hyphomicrobiales bacterium
GCA_003576995.1	QEVB00000000	SAMN08931190	CHB	Ignavibacteriota bacterium
GCA_003576955.1	QEVE00000000	SAMN08931213	NOB	Nitrospira sp.
GCA_003576905.1	QEVG00000000	SAMN08931215	PLA2	Planctomycetota bacterium
GCA_003576915.1	QEVF00000000	SAMN08931214	PLA1	Planctomycetota bacterium
GCA_003576855.1	QEVI00000000	SAMN08931217	PLA4	Planctomycetota bacterium
GCA_003576845.1	QEVJ00000000	SAMN08931218	PLA5	Planctomycetota bacterium
GCA_003576875.1	QEVH00000000	SAMN08931216	PLA3	Planctomycetota bacterium
GCA_003576765.1	QEVP00000000	SAMN08931224	PRO6	Pseudomonadota bacterium
GCA_003576805.1	QEVM00000000	SAMN08931221	PRO3	Pseudomonadota bacterium
GCA_003577265.1	QEVQ00000000	SAMN08931225	PRO7	Pseudomonadota bacterium
GCA_003577275.1	QEVO00000000	SAMN08931223	PRO5	Pseudomonadota bacterium
GCA_003577245.1	QEVS00000000	SAMN08931228	UCB2	bacterium
GCA_003576755.1	QEVT00000000	SAMN08931229	UCB3	bacterium
GCA_003576975.1	QEVD00000000	SAMN08931212	KSB	candidate division KSB1 bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	57
Data volume, Mbytes	24444

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bioreactor sludge metagenome

bioreactor sludge metagenome Genome sequencing and assembly

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