ID 436373 - BioProject

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Accession: PRJNA436373 ID: 436373

Carbapenem-Resistant Enterobacteriaceae at a Health Care System in Silicon Valley, California

Carbapenem-resistant Enterobacteriaceae (CRE) are emerging as a major health threat in North America. More...

Accession	PRJNA436373
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 28-Feb-2018 Stanford Healthcare
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	53993
WGS master	59
SRA Experiments	62
Other datasets
BioSample	62
Assembly	59

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

59
59

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_003400395.1	PXJO00000000	SAMN08623837	CRE89	Citrobacter freundii
GCA_003401585.1	PXLJ00000000	SAMN08623789	CRE13	Citrobacter freundii
GCA_003401455.1	PXLE00000000	SAMN08623795	CRE20	Citrobacter freundii
GCA_003401145.1	PXJT00000000	SAMN08623832	CRE81	Enterobacter cloacae
GCA_003400485.1	PXJR00000000	SAMN08623834	CRE86	Enterobacter cloacae
GCA_003400585.1	PXJX00000000	SAMN08623828	CRE74	Enterobacter hormaechei
GCA_003400405.1	PXJP00000000	SAMN08623836	CRE88	Enterobacter hormaechei
GCA_003400705.1	PXKP00000000	SAMN08623810	CRE36	Enterobacter hormaechei subsp. xiangfangensis
GCA_003400765.1	PXKS00000000	SAMN08623807	CRE33	Enterobacter hormaechei
GCA_003401205.1	PXKB00000000	SAMN08623824	CRE65	Enterobacter hormaechei subsp. xiangfangensis
GCA_003401165.1	PXJY00000000	SAMN08623827	CRE73	Enterobacter hormaechei
GCA_003401035.1	PXLL00000000	SAMN08623787	CRE11	Enterobacter hormaechei
GCA_003401515.1	PXLQ00000000	SAMN08623782	CRE06	Enterobacter hormaechei
GCA_003401175.1	PXKA00000000	SAMN08623825	CRE71	Enterobacter kobei
GCA_003401245.1	PXKD00000000	SAMN08623822	CRE54	Enterobacter kobei
GCA_003400715.1	PXKR00000000	SAMN08623808	CRE34	Enterobacter roggenkampii
GCA_003401005.1	PXLI00000000	SAMN08623790	CRE14	Escherichia coli
GCA_003402675.1	PXKC00000000	SAMN08623823	CRE60	Escherichia coli
GCA_003402785.1	PXKE00000000	SAMN08623821	CRE50	Escherichia coli
GCA_003400725.1	PXKJ00000000	SAMN08623816	CRE42	Escherichia coli
GCA_003400555.1	PXJW00000000	SAMN08623829	CRE75	Escherichia coli
GCA_003400445.1	PXJQ00000000	SAMN08623835	CRE87	Escherichia coli
GCA_003401105.1	PXLT00000000	SAMN08623777	CRE01	Escherichia coli
GCA_003400965.1	PXLH00000000	SAMN08623791	CRE15	Escherichia coli
GCA_003400975.1	PXLG00000000	SAMN08623792	CRE16	Escherichia coli
GCA_003401235.1	PXKG00000000	SAMN08623819	CRE45	Escherichia coli
GCA_003401285.1	PXKK00000000	SAMN08623815	CRE41	Klebsiella aerogenes
GCA_003401425.1	PXLB00000000	SAMN08623798	CRE23	Klebsiella aerogenes
GCA_003401475.1	PXLN00000000	SAMN08623785	CRE09	Klebsiella aerogenes
GCA_003401315.1	PXKM00000000	SAMN08623813	CRE39	Klebsiella aerogenes
GCA_003401085.1	PXLS00000000	SAMN08623779	CRE03	Klebsiella aerogenes
GCA_003400825.1	PXKX00000000	SAMN08623802	CRE27	Klebsiella aerogenes
GCA_003400785.1	PXKN00000000	SAMN08623812	CRE38	Klebsiella aerogenes
GCA_003400515.1	PXJV00000000	SAMN08623830	CRE77	Klebsiella aerogenes
GCA_003401345.1	PXKO00000000	SAMN08623811	CRE37	Klebsiella pneumoniae
GCA_003401365.1	PXKU00000000	SAMN08623805	CRE31	Klebsiella pneumoniae
GCA_003401375.1	PXKT00000000	SAMN08623806	CRE32	Klebsiella pneumoniae
GCA_003401275.1	PXKI00000000	SAMN08623817	CRE43	Klebsiella pneumoniae
GCA_003401525.1	PXLR00000000	SAMN08623780	CRE04	Klebsiella pneumoniae
GCA_003401435.1	PXKY00000000	SAMN08623801	CRE26	Klebsiella pneumoniae
GCA_003401505.1	PXLP00000000	SAMN08623783	CRE07	Klebsiella pneumoniae
GCA_003400495.1	PXJS00000000	SAMN08623833	CRE83	Klebsiella pneumoniae
GCA_003400685.1	PXKL00000000	SAMN08623814	CRE40	Klebsiella pneumoniae
GCA_003401015.1	PXLK00000000	SAMN08623788	CRE12	Klebsiella pneumoniae
GCA_003400795.1	PXKW00000000	SAMN08623803	CRE28	Klebsiella pneumoniae
GCA_003400845.1	PXKZ00000000	SAMN08623800	CRE25	Klebsiella pneumoniae
GCA_003401045.1	PXLM00000000	SAMN08623786	CRE10	Klebsiella pneumoniae
GCA_003401055.1	PXLO00000000	SAMN08623784	CRE08	Klebsiella pneumoniae
GCA_003400925.1	PXLF00000000	SAMN08623794	CRE18	Klebsiella pneumoniae
GCA_003400885.1	PXLA00000000	SAMN08623799	CRE24	Klebsiella pneumoniae
GCA_003400915.1	PXLC00000000	SAMN08623797	CRE22	Klebsiella pneumoniae
GCA_003400895.1	PXLD00000000	SAMN08623796	CRE21	Klebsiella pneumoniae
GCA_003400775.1	PXKV00000000	SAMN08623804	CRE30	Klebsiella quasipneumoniae
GCA_003402775.1	PXKQ00000000	SAMN08623809	CRE35	Serratia marcescens
GCA_003401215.1	PXKH00000000	SAMN08623818	CRE44	Serratia marcescens
GCA_003400635.1	PXKF00000000	SAMN08623820	CRE49	Serratia marcescens
GCA_003400615.1	PXJZ00000000	SAMN08623826	CRE72	Serratia marcescens
GCA_003400545.1	PXJU00000000	SAMN08623831	CRE78	Serratia marcescens
GCA_003400385.1	PXJN00000000	SAMN08623838	CRE94	Serratia marcescens

SRA Data Details

Parameter	Value
Data volume, Gbases	64
Data volume, Mbytes	26537

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Carbapenem-Resistant Enterobacteriaceae at a Health Care System in Silicon Valley, California

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