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Accession: PRJNA386810 ID: 386810

Gambusia affinis isolate:NE01 (western mosquitofish)

Gambusia affinis whole genome sequencing and assembly

See Genome Information for Gambusia affinis
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4 additional projects are related by organism.
Gambusia affinis whole genome sequencing and assembly This genome was assembled from two separate sequencing data each one obtained from a different fish
AccessionPRJNA386810
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismGambusia affinis[Taxonomy ID: 33528]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Gambusia; Gambusia affinis
PublicationsHoffberg SL et al., "A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia affinis Using a Chicago Library.", G3 (Bethesda), 2018 May 31;8(6):1855-1861
Grants
  • "Genetics of Invasive Species Exchanged Between the Southeastern U.S. and China, Taiwan and Hong Kong." (Grant ID OISE 0730218, National Science Foundation)
SubmissionRegistration date: 8-May-2018
University of Georgia
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)714
WGS master1
SRA Experiments2
Protein Sequences19445
Publications
PubMed1
PMC1
Other datasets
BioSample3
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_003097735.1ScaffoldNHOQ00000000SAMN07157452
Gambusia affinis
SRA Data Details
ParameterValue
Data volume, Gbases78
Data volume, Mbytes35866

Supplemental Content

Related information

LinkOut to external resources

  • GOLD: Gp0441027 [Genomes On Line Database]
    GOLD: Gp0441027
    Genomes On Line Database

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