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Accession: PRJNA198780 ID: 198780

Maylandia zebra isolate:#2_Kocher (zebra mbuna)

Maylandia zebra reference genome sequence

See Genome Information for Maylandia zebra
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8 additional projects are related by organism.

The reference sequence (RefSeq) genome assembly is provided by NCBI using assembly instructions provided by the Broad Institute.

AccessionPRJNA198780
Data TypeRefSeq Genome
ScopeMonoisolate
OrganismMaylandia zebra[Taxonomy ID: 106582]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex; Maylandia zebra
Publications
  • Conte MA et al., "An improved genome reference for the African cichlid, Metriaclima zebra.", BMC Genomics, 2015 Sep 22;16(1):724
  • Brawand D et al., "The genomic substrate for adaptive radiation in African cichlid fish.", Nature, 2014 Sep 18;513(7518):375-381
SubmissionRegistration date: 1-Dec-2011
- Broad Institute
- University of Maryland
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)52711
Transcript51000
Protein Sequences46160
Publications
PubMed2
PMC2
Other datasets
BioSample1
Assembly1
Genome assemblies, organelles and plasmids:
Assembly GCF_000238955.4 :
NameRefSeqGenBank
Mitochondrion NC_027944.1CM003499.1
Linkage group NC_036780.1CM009180.2
Linkage group NC_036781.1CM009181.2
Linkage group NC_036782.1CM009182.2
Linkage group NC_036783.1CM009183.2
Linkage group NC_036784.1CM009184.2
Linkage group NC_036785.1CM009185.2
Linkage group NC_036786.1CM009186.2
Linkage group NC_036787.1CM009187.2
Linkage group NC_036788.1CM009188.2
Linkage group NC_036789.1CM009189.2
Linkage group NC_036790.1CM009190.2
Linkage group NC_036791.1CM009191.2
Linkage group NC_036792.1CM009192.2
Linkage group NC_036793.1CM009193.2
Linkage group NC_036794.1CM009194.2
Linkage group NC_036795.1CM009195.2
Linkage group NC_036796.1CM009196.2
Linkage group NC_036797.1CM009197.2
Linkage group NC_036798.1CM009198.2
Linkage group NC_036799.1CM009199.2
Linkage group NC_036800.1CM009200.2
Linkage group NC_036801.1CM009201.2
Whole Genome Shotgun AssemblyAGTA00000000
Related GenBank Project
PRJNA60369 : Metriaclima zebra genome sequencing project.

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