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Links from Nucleotide

Accession: PRJNA299461 ID: 299461

Mycobacterium avium subsp. hominissuis

Mycobacterium avium subsp. hominissuis Genome sequencing and assembly

See Genome Information for Mycobacterium avium
Study of the population of Mycobacterium avium subsp. hominissuis
AccessionPRJNA299461
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismMycobacterium avium subsp. hominissuis[Taxonomy ID: 439334]
Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC); Mycobacterium avium; Mycobacterium avium subsp. hominissuis
PublicationsShoulah SA et al., "Environmental Mycobacterium avium subsp. hominissuis have a higher probability to act as a recipient in conjugation than clinical strains.", Plasmid, 2018 Jan;95:28-35
SubmissionRegistration date: 8-Mar-2016
Robert Koch Institute
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)15290
WGS master46
Publications
PubMed1
Other datasets
BioSample46
Assembly46
Assembly details:
Assembly levelNumber of Assemblies
30
16
46
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002894345.1ScaffoldPJCS00000000SAMN07966159
MAH-P-3269-08
GCA_002894725.1ScaffoldPECN00000000SAMN07829377
MAH-P-1620-04
GCA_002894715.1ScaffoldPEHE00000000SAMN07808707
MAH-E-14-1
GCA_002928265.1ScaffoldPSNN00000000SAMN07829579
MAH-P-9268/06
GCA_002928255.1ScaffoldPSNM00000000SAMN07829560
MAH-P-4557/08
GCA_002928225.1ScaffoldPSNL00000000SAMN07829551
MAH-P-9036/04
GCA_002928215.1ScaffoldPSNK00000000SAMN07829549
MAH-P-3646/08
GCA_003013375.1ScaffoldPTLR00000000SAMN07829508
MAH-P-2630-08
GCA_001956335.1ContigLVCS00000000SAMN04566723
E-128
GCA_001610565.1ContigLNAJ00000000SAMN04229415
MAH-E-149-2
GCA_001609945.1ScaffoldLNBK00000000SAMN04226726
MAH-E-3044
GCA_001609925.1ScaffoldLNBI00000000SAMN04226721
MAH-P-10203-06
GCA_001609985.1ScaffoldLNBL00000000SAMN04226727
MAH-P-528-08
GCA_001609975.1ScaffoldLNBJ00000000SAMN04226724
MAH-E-2514
GCA_001610055.1ScaffoldLNBP00000000SAMN04226733
MAH-P-2014-08
GCA_001610065.1ScaffoldLNBN00000000SAMN04226729
MAH-P-709-08
GCA_001610035.1ScaffoldLNBO00000000SAMN04226732
MAH-P-772-08
GCA_001610005.1ScaffoldLNBM00000000SAMN04226728
MAH-P-589-08
GCA_001610235.1ContigLMVR00000000SAMN04229400
MAH-E-88-1
GCA_001610215.1ContigLNAG00000000SAMN04229399
MAH-E-83-1
GCA_001610185.1ContigLNAF00000000SAMN04229397
MAH-E-82-7
GCA_001610165.1ScaffoldLNAW00000000SAMN04229396
MAH-P-11082-03
GCA_001610145.1ContigLNBS00000000SAMN04226740
MAHP-883
GCA_001610135.1ScaffoldLNBT00000000SAMN04226741
MAH-P-7673-04
GCA_001610105.1ScaffoldLNBQ00000000SAMN04226738
MAH-P-3449-08
GCA_001610095.1ScaffoldLNBR00000000SAMN04226739
MAH-P-4023-08
GCA_001610545.1ContigLMVZ00000000SAMN04229411
MAH-E-106
GCA_001610525.1ContigLMWA00000000SAMN04229412
MAH-E-108
GCA_001610515.1ScaffoldLNAX00000000SAMN04229413
MAH-E-118
GCA_001610475.1ScaffoldLNBA00000000SAMN04229488
MAHP-04-13
GCA_001610465.1ScaffoldLNAZ00000000SAMN04229487
MAH-E-149-7
GCA_001610445.1ScaffoldLNAY00000000SAMN04229486
MAH-E-149-3
GCA_001610435.1ScaffoldLNBB00000000SAMN04229489
MAH-P-0913
GCA_001610405.1ContigLMVX00000000SAMN04229409
MAH-E-101-6
GCA_001610395.1ContigLMVY00000000SAMN04229410
MAH-E-104-1
GCA_001610375.1ContigLMVV00000000SAMN04229407
MAH-E-63-1
GCA_001610355.1ContigLMVW00000000SAMN04229408
MAH-E-96-2
GCA_001610335.1ContigLNAI00000000SAMN04229405
MAH-E-61-1y
GCA_001610315.1ContigLNAH00000000SAMN04229404
MAH-E-61-1t
GCA_001610285.1ScaffoldLMVU00000000SAMN04229403
MAH-E-57-3
GCA_001610265.1ContigLMVT00000000SAMN04229402
MAHE-22-1
GCA_001610245.1ContigLMVS00000000SAMN04229401
MAH-E-89-1
GCA_001609865.1ScaffoldLNBF00000000SAMN04226693
MAH-P-9060-06
GCA_001609905.1ScaffoldLNBH00000000SAMN04226719
MAH-P-8933-06
GCA_001609895.1ScaffoldLNBG00000000SAMN04226718
MAHP-10058-06
GCA_001583545.1ScaffoldLNAV00000000SAMN04208087
MAH-P-10091-06

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