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Accession: PRJNA286987 ID: 286987

Francisella tularensis subsp. holarctica

Francisella tularensis subsp. holarctica Genome sequencing and assembly

See Genome Information for Francisella tularensis
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174 additional projects are related by organism.
Whole genome phylogeny of the Swiss Francisella tularensis holarctica population with a focus on the relevance of ticks as zoonotic vectors
AccessionPRJNA286987
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismFrancisella tularensis subsp. holarctica[Taxonomy ID: 119857]
Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella; Francisella tularensis; Francisella tularensis subsp. holarctica
PublicationsDwibedi C et al., "Long-range dispersal moved Francisella tularensis into Western Europe from the East.", Microb Genom, 2016 Dec;2(12):e000100
SubmissionRegistration date: 15-Mar-2017
Spiez Laboratory
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)5898
WGS master59
Protein Sequences95103
Publications
PubMed1
PMC1
Other datasets
BioSample75
Assembly59
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
2
57
59
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002027785.1ContigMQVE00000000SAMN03774942
FT16C-B1
Francisella tularensis subsp. holarctica
GCA_002027765.1ContigMQVF00000000SAMN03774935
FT8C-4F
Francisella tularensis subsp. holarctica
GCA_002027745.1ContigMQVD00000000SAMN03774936
FT9C-G7
Francisella tularensis subsp. holarctica
GCA_002027725.1ContigMQVC00000000SAMN03774932
FT-32
Francisella tularensis subsp. holarctica
GCA_002857425.1ContigPJZX00000000SAMN08108689
B.89
Francisella tularensis subsp. holarctica
GCA_002858505.1ContigPKBX00000000SAMN08108636
B.90
Francisella tularensis subsp. holarctica
GCA_002858465.1ScaffoldPKBW00000000SAMN08108637
B.88
Francisella tularensis subsp. holarctica
GCA_002858485.1ContigPKBU00000000SAMN08108639
B.85
Francisella tularensis subsp. holarctica
GCA_002858425.1ContigPKBT00000000SAMN08108640
B.49
Francisella tularensis subsp. holarctica
GCA_002858435.1ScaffoldPKBV00000000SAMN08108638
B.85
Francisella tularensis subsp. holarctica
GCA_002858405.1ContigPKBS00000000SAMN08108641
B.85
Francisella tularensis subsp. holarctica
GCA_002858385.1ContigPKBQ00000000SAMN08108643
B.49
Francisella tularensis subsp. holarctica
GCA_002858365.1ContigPKBP00000000SAMN08108644
B.46
Francisella tularensis subsp. holarctica
GCA_002858345.1ContigPKBR00000000SAMN08108642
B.46
Francisella tularensis subsp. holarctica
GCA_002858315.1ContigPKBO00000000SAMN08108645
B.53
Francisella tularensis subsp. holarctica
GCA_002858305.1ContigPKBN00000000SAMN08108646
B.89
Francisella tularensis subsp. holarctica
GCA_002858285.1ContigPKBM00000000SAMN08108647
B.85
Francisella tularensis subsp. holarctica
GCA_002858265.1ContigPKBL00000000SAMN08108648
B.45
Francisella tularensis subsp. holarctica
GCA_002858245.1ContigPKBK00000000SAMN08108649
B.87
Francisella tularensis subsp. holarctica
GCA_002858215.1ContigPKBI00000000SAMN08108651
B.61
Francisella tularensis subsp. holarctica
GCA_002858205.1ContigPKBH00000000SAMN08108652
B.46
Francisella tularensis subsp. holarctica
GCA_002858185.1ContigPKBJ00000000SAMN08108650
B.88
Francisella tularensis subsp. holarctica
GCA_002858165.1ContigPKBF00000000SAMN08108654
B.33
Francisella tularensis subsp. holarctica
GCA_002858145.1ContigPKBG00000000SAMN08108653
B.46
Francisella tularensis subsp. holarctica
GCA_002858115.1ContigPKBE00000000SAMN08108655
B.88
Francisella tularensis subsp. holarctica
GCA_002858105.1ContigPKBD00000000SAMN08108656
B.33
Francisella tularensis subsp. holarctica
GCA_002858075.1ContigPKBC00000000SAMN08108657
B.89
Francisella tularensis subsp. holarctica
GCA_002858065.1ContigPKBB00000000SAMN08108658
B.53
Francisella tularensis subsp. holarctica
GCA_002858045.1ContigPKBA00000000SAMN08108659
B.62
Francisella tularensis subsp. holarctica
GCA_002858015.1ContigPKAX00000000SAMN08108662
B.45
Francisella tularensis subsp. holarctica
GCA_002858005.1ContigPKAZ00000000SAMN08108660
B.62
Francisella tularensis subsp. holarctica
GCA_002857985.1ContigPKAY00000000SAMN08108661
B.62
Francisella tularensis subsp. holarctica
GCA_002857955.1ContigPKAW00000000SAMN08108663
B.59
Francisella tularensis subsp. holarctica
GCA_002857945.1ContigPKAV00000000SAMN08108664
B.62
Francisella tularensis subsp. holarctica
GCA_002857915.1ContigPKAU00000000SAMN08108665
B.59
Francisella tularensis subsp. holarctica
GCA_002857905.1ContigPKAT00000000SAMN08108666
B.62
Francisella tularensis subsp. holarctica
GCA_002857875.1ContigPKAS00000000SAMN08108667
B.53
Francisella tularensis subsp. holarctica
GCA_002857845.1ContigPKAQ00000000SAMN08108669
B.49
Francisella tularensis subsp. holarctica
GCA_002857865.1ContigPKAR00000000SAMN08108668
B.91
Francisella tularensis subsp. holarctica
GCA_002857815.1ContigPKAP00000000SAMN08108670
B.87
Francisella tularensis subsp. holarctica
GCA_002857805.1ContigPKAO00000000SAMN08108671
B.61
Francisella tularensis subsp. holarctica
GCA_002857785.1ContigPKAN00000000SAMN08108672
B.61
Francisella tularensis subsp. holarctica
GCA_002857765.1ContigPKAM00000000SAMN08108673
B.61
Francisella tularensis subsp. holarctica
GCA_002857745.1ContigPKAL00000000SAMN08108674
B.87
Francisella tularensis subsp. holarctica
GCA_002857715.1ContigPKAJ00000000SAMN08108676
B.53
Francisella tularensis subsp. holarctica
GCA_002857705.1ContigPKAI00000000SAMN08108677
B.90
Francisella tularensis subsp. holarctica
GCA_002857685.1ContigPKAK00000000SAMN08108675
B.45
Francisella tularensis subsp. holarctica
GCA_002857665.1ContigPKAH00000000SAMN08108678
B.61
Francisella tularensis subsp. holarctica
GCA_002857635.1ContigPKAG00000000SAMN08108679
B.85
Francisella tularensis subsp. holarctica
GCA_002857625.1ContigPKAF00000000SAMN08108680
B.90
Francisella tularensis subsp. holarctica
GCA_002857605.1ContigPKBY00000000SAMN08108681
B.87
Francisella tularensis subsp. holarctica
GCA_002857585.1ContigPKAE00000000SAMN08108682
B.33
Francisella tularensis subsp. holarctica
GCA_002857565.1ContigPKAD00000000SAMN08108683
B.33
Francisella tularensis subsp. holarctica
GCA_002857545.1ContigPKAC00000000SAMN08108684
B.45
Francisella tularensis subsp. holarctica
GCA_002857515.1ContigPKAB00000000SAMN08108685
B.85
Francisella tularensis subsp. holarctica
GCA_002857505.1ContigPKAA00000000SAMN08108686
B.91
Francisella tularensis subsp. holarctica
GCA_002857465.1ContigPJZZ00000000SAMN08108687
B.33
Francisella tularensis subsp. holarctica
GCA_002857475.1ContigPJZW00000000SAMN08108690
B.62
Francisella tularensis subsp. holarctica
GCA_002857445.1ContigPJZY00000000SAMN08108688
B.45
Francisella tularensis subsp. holarctica

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