Francisella tularensis subsp. holarctica (ID 286987) - BioProject

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Accession: PRJNA286987 ID: 286987

Francisella tularensis subsp. holarctica

Francisella tularensis subsp. holarctica Genome sequencing and assembly

See Genome Information for Francisella tularensis

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Whole genome phylogeny of the Swiss Francisella tularensis holarctica population with a focus on the relevance of ticks as zoonotic vectors

Accession	PRJNA286987
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Francisella tularensis subsp. holarctica[Taxonomy ID: 119857] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella; Francisella tularensis; Francisella tularensis subsp. holarctica
Publications	Dwibedi C et al., "Long-range dispersal moved Francisella tularensis into Western Europe from the East.", Microb Genom, 2016 Dec;2(12):e000100
Submission	Registration date: 15-Mar-2017 Spiez Laboratory
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5898
WGS master	59
Protein Sequences	95103
Publications
PubMed	1
PMC	1
Other datasets
BioSample	75
Assembly	59

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

2
57
59

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002027785.1	MQVE00000000	SAMN03774942	FT16C-B1	Francisella tularensis subsp. holarctica
GCA_002027765.1	MQVF00000000	SAMN03774935	FT8C-4F	Francisella tularensis subsp. holarctica
GCA_002027745.1	MQVD00000000	SAMN03774936	FT9C-G7	Francisella tularensis subsp. holarctica
GCA_002027725.1	MQVC00000000	SAMN03774932	FT-32	Francisella tularensis subsp. holarctica
GCA_002857425.1	PJZX00000000	SAMN08108689	B.89	Francisella tularensis subsp. holarctica
GCA_002858505.1	PKBX00000000	SAMN08108636	B.90	Francisella tularensis subsp. holarctica
GCA_002858465.1	PKBW00000000	SAMN08108637	B.88	Francisella tularensis subsp. holarctica
GCA_002858485.1	PKBU00000000	SAMN08108639	B.85	Francisella tularensis subsp. holarctica
GCA_002858425.1	PKBT00000000	SAMN08108640	B.49	Francisella tularensis subsp. holarctica
GCA_002858435.1	PKBV00000000	SAMN08108638	B.85	Francisella tularensis subsp. holarctica
GCA_002858405.1	PKBS00000000	SAMN08108641	B.85	Francisella tularensis subsp. holarctica
GCA_002858385.1	PKBQ00000000	SAMN08108643	B.49	Francisella tularensis subsp. holarctica
GCA_002858365.1	PKBP00000000	SAMN08108644	B.46	Francisella tularensis subsp. holarctica
GCA_002858345.1	PKBR00000000	SAMN08108642	B.46	Francisella tularensis subsp. holarctica
GCA_002858315.1	PKBO00000000	SAMN08108645	B.53	Francisella tularensis subsp. holarctica
GCA_002858305.1	PKBN00000000	SAMN08108646	B.89	Francisella tularensis subsp. holarctica
GCA_002858285.1	PKBM00000000	SAMN08108647	B.85	Francisella tularensis subsp. holarctica
GCA_002858265.1	PKBL00000000	SAMN08108648	B.45	Francisella tularensis subsp. holarctica
GCA_002858245.1	PKBK00000000	SAMN08108649	B.87	Francisella tularensis subsp. holarctica
GCA_002858215.1	PKBI00000000	SAMN08108651	B.61	Francisella tularensis subsp. holarctica
GCA_002858205.1	PKBH00000000	SAMN08108652	B.46	Francisella tularensis subsp. holarctica
GCA_002858185.1	PKBJ00000000	SAMN08108650	B.88	Francisella tularensis subsp. holarctica
GCA_002858165.1	PKBF00000000	SAMN08108654	B.33	Francisella tularensis subsp. holarctica
GCA_002858145.1	PKBG00000000	SAMN08108653	B.46	Francisella tularensis subsp. holarctica
GCA_002858115.1	PKBE00000000	SAMN08108655	B.88	Francisella tularensis subsp. holarctica
GCA_002858105.1	PKBD00000000	SAMN08108656	B.33	Francisella tularensis subsp. holarctica
GCA_002858075.1	PKBC00000000	SAMN08108657	B.89	Francisella tularensis subsp. holarctica
GCA_002858065.1	PKBB00000000	SAMN08108658	B.53	Francisella tularensis subsp. holarctica
GCA_002858045.1	PKBA00000000	SAMN08108659	B.62	Francisella tularensis subsp. holarctica
GCA_002858015.1	PKAX00000000	SAMN08108662	B.45	Francisella tularensis subsp. holarctica
GCA_002858005.1	PKAZ00000000	SAMN08108660	B.62	Francisella tularensis subsp. holarctica
GCA_002857985.1	PKAY00000000	SAMN08108661	B.62	Francisella tularensis subsp. holarctica
GCA_002857955.1	PKAW00000000	SAMN08108663	B.59	Francisella tularensis subsp. holarctica
GCA_002857945.1	PKAV00000000	SAMN08108664	B.62	Francisella tularensis subsp. holarctica
GCA_002857915.1	PKAU00000000	SAMN08108665	B.59	Francisella tularensis subsp. holarctica
GCA_002857905.1	PKAT00000000	SAMN08108666	B.62	Francisella tularensis subsp. holarctica
GCA_002857875.1	PKAS00000000	SAMN08108667	B.53	Francisella tularensis subsp. holarctica
GCA_002857845.1	PKAQ00000000	SAMN08108669	B.49	Francisella tularensis subsp. holarctica
GCA_002857865.1	PKAR00000000	SAMN08108668	B.91	Francisella tularensis subsp. holarctica
GCA_002857815.1	PKAP00000000	SAMN08108670	B.87	Francisella tularensis subsp. holarctica
GCA_002857805.1	PKAO00000000	SAMN08108671	B.61	Francisella tularensis subsp. holarctica
GCA_002857785.1	PKAN00000000	SAMN08108672	B.61	Francisella tularensis subsp. holarctica
GCA_002857765.1	PKAM00000000	SAMN08108673	B.61	Francisella tularensis subsp. holarctica
GCA_002857745.1	PKAL00000000	SAMN08108674	B.87	Francisella tularensis subsp. holarctica
GCA_002857715.1	PKAJ00000000	SAMN08108676	B.53	Francisella tularensis subsp. holarctica
GCA_002857705.1	PKAI00000000	SAMN08108677	B.90	Francisella tularensis subsp. holarctica
GCA_002857685.1	PKAK00000000	SAMN08108675	B.45	Francisella tularensis subsp. holarctica
GCA_002857665.1	PKAH00000000	SAMN08108678	B.61	Francisella tularensis subsp. holarctica
GCA_002857635.1	PKAG00000000	SAMN08108679	B.85	Francisella tularensis subsp. holarctica
GCA_002857625.1	PKAF00000000	SAMN08108680	B.90	Francisella tularensis subsp. holarctica
GCA_002857605.1	PKBY00000000	SAMN08108681	B.87	Francisella tularensis subsp. holarctica
GCA_002857585.1	PKAE00000000	SAMN08108682	B.33	Francisella tularensis subsp. holarctica
GCA_002857565.1	PKAD00000000	SAMN08108683	B.33	Francisella tularensis subsp. holarctica
GCA_002857545.1	PKAC00000000	SAMN08108684	B.45	Francisella tularensis subsp. holarctica
GCA_002857515.1	PKAB00000000	SAMN08108685	B.85	Francisella tularensis subsp. holarctica
GCA_002857505.1	PKAA00000000	SAMN08108686	B.91	Francisella tularensis subsp. holarctica
GCA_002857465.1	PJZZ00000000	SAMN08108687	B.33	Francisella tularensis subsp. holarctica
GCA_002857475.1	PJZW00000000	SAMN08108690	B.62	Francisella tularensis subsp. holarctica
GCA_002857445.1	PJZY00000000	SAMN08108688	B.45	Francisella tularensis subsp. holarctica

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Francisella tularensis subsp. holarctica

Francisella tularensis subsp. holarctica Genome sequencing and assembly

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