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Accession: PRJNA391950 ID: 391950

subsurface metagenome

A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer

Metagenomic assessment of 15 marine subsurface aquifer samples from which 195 draft genomes were reconstructed and analyzed.
AccessionPRJNA391950
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsubsurface metagenome[Taxonomy ID: 1564682]
unclassified sequences; metagenomes; ecological metagenomes; subsurface metagenome
PublicationsTully BJ et al., "A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer.", ISME J, 2018 Jan;12(1):1-16
Grants
  • "Center for Dark Energy Biosphere Investigations" (Grant ID OCE-0939654, National Science Foundation)
SubmissionRegistration date: 20-Sep-2017
University of Southern California
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)17873
WGS master332
SRA Experiments17
Protein Sequences416252
Publications
PubMed1
PMC1
Other datasets
BioSample349
Assembly332
Assembly details:
Assembly levelNumber of Assemblies
12
320
332
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_002733395.1ContigNVVQ00000000SAMN07568873
NORP59
GCA_016765175.1ContigJAESQL000000000SAMN17309486
NORP225
GCA_002733915.1ContigNVXN00000000SAMN07568824
NORP10
GCA_016764615.1ContigJAESRN000000000SAMN17309514
NORP260
GCA_016763695.1ContigJAESTH000000000SAMN17309560
NORP309
GCA_002733835.1ContigNVWY00000000SAMN07568839
NORP25
GCA_002733325.1ContigNVVF00000000SAMN07568884
NORP70
GCA_016762945.1ContigJAESUS000000000SAMN17309597
NORP347
GCA_016764175.1ContigJAESSI000000000SAMN17309535
NORP281
GCA_016764055.1ContigJAESSO000000000SAMN17309541
NORP288
GCA_016764915.1ContigJAESQY000000000SAMN17309499
NORP241
GCA_002733545.1ContigNVVX00000000SAMN07568866
NORP52
GCA_002749135.1ContigNVVY00000000SAMN07568865
NORP51
GCA_002402225.1ContigNVVM00000000SAMN07568877
NORP63
GCA_002401965.1ContigNVUR00000000SAMN07568898
NORP84
GCA_002401695.1ContigNVTV00000000SAMN07568920
NORP106
GCA_002401545.1ContigNVTJ00000000SAMN07568932
NORP118
GCA_002401455.1ContigNVTE00000000SAMN07568937
NORP123
GCA_002401195.1ContigNVSI00000000SAMN07568959
NORP145
GCA_016764135.1ContigJAESSL000000000SAMN17309538
NORP285
GCA_016764775.1ContigJAESRE000000000SAMN17309505
NORP248
GCA_016763095.1ContigJAESUK000000000SAMN17309589
NORP339
GCA_002400495.2ContigNVQL00000000SAMN07569008
NORP194
GCA_002746115.1ContigNVXL00000000SAMN07568826
NORP12
GCA_016765535.1ContigJAESPQ000000000SAMN17309465
NORP200
GCA_002733295.1ContigNVVC00000000SAMN07568887
NORP73
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NORP268
GCA_002733885.1ContigNVXJ00000000SAMN07568828
NORP14
GCA_002733685.1ContigNVWN00000000SAMN07568850
NORP36
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NORP303
GCA_016763635.1ContigJAESTL000000000SAMN17309564
NORP313
GCA_002400765.1ContigNVRE00000000SAMN07568989
NORP175
GCA_016763665.1ContigJAESTI000000000SAMN17309561
NORP310
GCA_016764115.1ContigJAESSM000000000SAMN17309539
NORP286
GCA_002401055.1ContigNVRZ00000000SAMN07568968
NORP154
GCA_002400835.1ContigNVRJ00000000SAMN07568984
NORP170
GCA_002746975.1ContigNVXE00000000SAMN07568833
NORP19
GCA_002746305.1ContigNVWV00000000SAMN07568842
NORP28
GCA_002733575.1ContigNVWB00000000SAMN07568862
NORP48
GCA_002400655.1ContigNVQW00000000SAMN07568997
NORP183
GCA_002402025.1ContigNVUU00000000SAMN07568895
NORP81
GCA_002401865.1ContigNVUK00000000SAMN07568905
NORP91
GCA_016763165.1ContigJAESUJ000000000SAMN17309588
NORP338
GCA_002402105.1ContigNVVD00000000SAMN07568886
NORP72
GCA_002401785.1ContigNVUD00000000SAMN07568912
NORP98
GCA_016763975.1ContigJAESSS000000000SAMN17309545
NORP293
GCA_002746185.1ContigNVWG00000000SAMN07568857
NORP43
GCA_002401925.1ContigNVUN00000000SAMN07568902
NORP88
GCA_002401125.1ContigNVSE00000000SAMN07568963
NORP149
GCA_002401495.1ContigNVTG00000000SAMN07568935
NORP121
GCA_016765405.1ContigJAESPZ000000000SAMN17309474
NORP209
GCA_002400685.1ContigNVQZ00000000SAMN07568994
NORP180
GCA_002402135.1ContigNVVH00000000SAMN07568882
NORP68
GCA_002746175.1ContigNVWH00000000SAMN07568856
NORP42
GCA_016763615.1ContigJAESTJ000000000SAMN17309562
NORP311
GCA_002732835.1ContigNVSV00000000SAMN07568946
NORP132
GCA_002401425.1ContigNVTB00000000SAMN07568940
NORP126
GCA_002401345.1ContigNVSU00000000SAMN07568947
NORP133
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NORP124
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NORP156
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NORP189
GCA_002746135.1ScaffoldNVWE00000000SAMN07568859
NORP45
GCA_016764735.1ContigJAESRH000000000SAMN17309508
NORP252
GCA_016765315.1ContigJAESQD000000000SAMN17309478
NORP217
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NORP264
GCA_002733765.1ContigNVWU00000000SAMN07568843
NORP29
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NORP207
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NORP201
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NORP262
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NORP236
GCA_002734005.2ContigNVXS00000000SAMN07568819
NORP5
GCA_002732805.1ContigNVSS00000000SAMN07568949
NORP135
GCA_016765215.1ContigJAESQK000000000SAMN17309485
NORP224
GCA_002733135.1ContigNVUJ00000000SAMN07568906
NORP92
GCA_002733785.1ContigNVXF00000000SAMN07568832
NORP18
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NORP271
GCA_002401025.1ContigNVRY00000000SAMN07568969
NORP155
GCA_002746355.1ScaffoldNVWX00000000SAMN07568840
NORP26
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NORP243
GCA_016765495.1ContigJAESPV000000000SAMN17309470
NORP205
GCA_002733995.1ContigNVXR00000000SAMN07568820
NORP6
GCA_002401775.2ContigNVUB00000000SAMN07568914
NORP100
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NORP122
GCA_016765435.1ContigJAESPY000000000SAMN17309473
NORP208
GCA_016764855.1ContigJAESRB000000000SAMN17309502
NORP245
GCA_016763275.1ContigJAESUB000000000SAMN17309580
NORP329
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NORP331
GCA_002733035.1ContigNVUA00000000SAMN07568915
NORP101
GCA_016764075.1ContigJAESSN000000000SAMN17309540
NORP287
GCA_016765145.1ContigJAESQM000000000SAMN17309487
NORP226
GCA_016765475.1ContigJAESPW000000000SAMN17309471
NORP206
GCA_002400745.1ContigNVRD00000000SAMN07568990
NORP176
GCA_002400885.1ContigNVRM00000000SAMN07568981
NORP167
GCA_002400505.1ContigNVQO00000000SAMN07569005
NORP191
GCA_002401215.1ContigNVSL00000000SAMN07568956
NORP142
GCA_002401385.1ContigNVSY00000000SAMN07568943
NORP129
GCA_002401105.1ContigNVSD00000000SAMN07568964
NORP150
GCA_002746415.1ContigNVXD00000000SAMN07568834
NORP20
GCA_016765575.1ContigJAESPU000000000SAMN17309469
NORP204
GCA_016765375.1ContigJAESQB000000000SAMN17309476
NORP215
GCA_016764435.1ContigJAESRX000000000SAMN17309524
NORP270
GCA_016763215.1ContigJAESUF000000000SAMN17309584
NORP333
GCA_016763595.1ContigJAESTN000000000SAMN17309566
NORP315
GCA_016763715.1ContigJAESTG000000000SAMN17309559
NORP308
GCA_016762915.1ContigJAESUR000000000SAMN17309596
NORP346
GCA_002400975.1ContigNVRW00000000SAMN07568971
NORP157
GCA_002402165.1ContigNVVI00000000SAMN07568881
NORP67
GCA_002401955.1ContigNVUQ00000000SAMN07568899
NORP85
GCA_002746335.1ContigNVWW00000000SAMN07568841
NORP27
GCA_002746095.2ContigNVXW00000000SAMN07568815
NORP1
GCA_016763015.1ContigJAESUP000000000SAMN17309594
NORP344
GCA_016763135.1ContigJAESUI000000000SAMN17309587
NORP337
GCA_016762935.1ContigJAESUQ000000000SAMN17309595
NORP345
GCA_016763995.1ContigJAESST000000000SAMN17309546
NORP294
GCA_016763645.1ContigJAESTK000000000SAMN17309563
NORP312
GCA_016763795.1ContigJAESTF000000000SAMN17309558
NORP307
GCA_016763775.1ContigJAESTC000000000SAMN17309555
NORP304
GCA_016763415.1ContigJAESTT000000000SAMN17309572
NORP321
GCA_016764395.1ContigJAESRW000000000SAMN17309523
NORP269
GCA_016763935.1ContigJAESSW000000000SAMN17309549
NORP297
GCA_016764265.1ContigJAESSF000000000SAMN17309532
NORP278
GCA_002733185.1ContigNVUT00000000SAMN07568896
NORP82
GCA_002734085.1ContigNVXV00000000SAMN07568816
NORP2
GCA_002733985.1ContigNVXP00000000SAMN07568822
NORP8
GCA_002734065.2ContigNVXU00000000SAMN07568817
NORP3
GCA_002746155.1ContigNVWF00000000SAMN07568858
NORP44
GCA_002401655.1ContigNVTT00000000SAMN07568922
NORP108
GCA_002401725.1ScaffoldNVTW00000000SAMN07568919
NORP105
GCA_002402085.1ScaffoldNVVB00000000SAMN07568888
NORP74
GCA_002402245.1ContigNVVP00000000SAMN07568874
NORP60
GCA_002401065.1ContigNVSB00000000SAMN07568966
NORP152
GCA_002401185.1ContigNVSH00000000SAMN07568960
NORP146
GCA_002401605.1ContigNVTM00000000SAMN07568929
NORP115
GCA_002400805.1ContigNVRG00000000SAMN07568987
NORP173
GCA_002400775.1ContigNVRF00000000SAMN07568988
NORP174
GCA_002400725.1ContigNVRB00000000SAMN07568992
NORP178
GCA_002400905.2ContigNVRQ00000000SAMN07568977
NORP163
GCA_016762995.1ContigJAESUT000000000SAMN17309598
NORP348
GCA_016762975.1ContigJAESUV000000000SAMN17309600
NORP350
GCA_016765075.1ContigJAESQP000000000SAMN17309490
NORP231
GCA_016764875.1ContigJAESQX000000000SAMN17309498
NORP240
GCA_016764235.1ContigJAESSG000000000SAMN17309533
NORP279
GCA_016764035.1ContigJAESSQ000000000SAMN17309543
NORP290
GCA_016764495.1ContigJAESRS000000000SAMN17309519
NORP265
GCA_016763565.1ContigJAESTO000000000SAMN17309567
NORP316
GCA_002733025.1ContigNVTZ00000000SAMN07568916
NORP102
GCA_002733435.2ContigNVVS00000000SAMN07568871
NORP57
GCA_002733705.1ContigNVWP00000000SAMN07568848
NORP34
GCA_002733955.1ContigNVXQ00000000SAMN07568821
NORP7
GCA_002746425.1ContigNVXB00000000SAMN07568836
NORP22
GCA_002401855.1ContigNVUH00000000SAMN07568908
NORP94
GCA_002400485.1ContigNVQN00000000SAMN07569006
NORP192
GCA_002400615.1ContigNVQT00000000SAMN07569000
NORP186
GCA_002401155.1ContigNVSG00000000SAMN07568961
NORP147
GCA_002400925.1ContigNVRU00000000SAMN07568973
NORP159
GCA_016763525.1ContigJAESTQ000000000SAMN17309569
NORP318
GCA_016764455.1ContigJAESRU000000000SAMN17309521
NORP267
GCA_002400845.2ContigNVRK00000000SAMN07568983
NORP169
GCA_016765355.1ContigJAESQC000000000SAMN17309477
NORP216
GCA_002733825.1ContigNVXC00000000SAMN07568835
NORP21
GCA_002732945.1ContigNVTN00000000SAMN07568928
NORP114
GCA_002732745.1ContigNVSJ00000000SAMN07568958
NORP144
GCA_016765105.1ContigJAESQO000000000SAMN17309489
NORP230
GCA_016764375.1ContigJAESRZ000000000SAMN17309526
NORP272
GCA_016763355.1ContigJAESTY000000000SAMN17309577
NORP326
GCA_002733465.1ContigNVVT00000000SAMN07568870
NORP56
GCA_016763395.1ContigJAESTW000000000SAMN17309575
NORP324
GCA_002733415.1ContigNVVR00000000SAMN07568872
NORP58
GCA_016763495.1ContigJAESTR000000000SAMN17309570
NORP319
GCA_016765035.1ContigJAESQS000000000SAMN17309493
NORP235
GCA_016764715.1ContigJAESRJ000000000SAMN17309510
NORP254
GCA_002401685.1ContigNVTU00000000SAMN07568921
NORP107
GCA_016760525.1ContigJAESUW000000000SAMN17309601
NORP351
GCA_002733585.1ContigNVVZ00000000SAMN07568864
NORP50
GCA_002400645.1ContigNVQV00000000SAMN07568998
NORP184
GCA_002733665.1ContigNVWM00000000SAMN07568851
NORP37
GCA_002733285.1ContigNVVE00000000SAMN07568885
NORP71
GCA_002732565.1ContigNVQU00000000SAMN07568999
NORP185
GCA_016765555.1ContigJAESPS000000000SAMN17309467
NORP202
GCA_016764195.1ContigJAESSJ000000000SAMN17309536
NORP282
GCA_016764335.1ContigJAESSB000000000SAMN17309528
NORP274
GCA_016763255.1ContigJAESUA000000000SAMN17309579
NORP328
GCA_016763895.1ContigJAESSV000000000SAMN17309548
NORP296
GCA_002732595.1ContigNVRC00000000SAMN07568991
NORP177
GCA_016763375.1ContigJAESTX000000000SAMN17309576
NORP325
GCA_002732725.1ContigNVSC00000000SAMN07568965
NORP151
GCA_002733265.1ContigNVVA00000000SAMN07568889
NORP75
GCA_002732955.1ContigNVTR00000000SAMN07568924
NORP110
GCA_002732995.1ContigNVTS00000000SAMN07568923
NORP109
GCA_016764555.1ContigJAESRQ000000000SAMN17309517
NORP263
GCA_016764685.1ContigJAESRK000000000SAMN17309511
NORP257
GCA_002317815.1ContigNVQX00000000SAMN07568996
NORP182
GCA_002733335.1ContigNVVK00000000SAMN07568879
NORP65
GCA_002733105.1ContigNVUI00000000SAMN07568907
NORP93
GCA_002733505.1ContigNVVW00000000SAMN07568867
NORP53
GCA_002734025.2ContigNVXT00000000SAMN07568818
NORP4
GCA_002733715.2ContigNVWQ00000000SAMN07568847
NORP33
GCA_002401735.1ContigNVTX00000000SAMN07568918
NORP104
GCA_002402125.1ContigNVVG00000000SAMN07568883
NORP69
GCA_002401525.1ContigNVTH00000000SAMN07568934
NORP120
GCA_002733565.1ScaffoldNVWD00000000SAMN07568860
NORP46
GCA_002733065.2ContigNVUE00000000SAMN07568911
NORP97
GCA_016763755.1ContigJAESTD000000000SAMN17309556
NORP305
GCA_016763875.1ContigJAESSZ000000000SAMN17309552
NORP301
GCA_002317825.1ContigNVRT00000000SAMN07568974
NORP160
GCA_002317805.1ContigNVRP00000000SAMN07568978
NORP164
GCA_002317795.1ContigNVWC00000000SAMN07568861
NORP47
GCA_016763735.1ContigJAESTE000000000SAMN17309557
NORP306
GCA_002402005.2ContigNVUS00000000SAMN07568897
NORP83
GCA_002733645.1ContigNVWL00000000SAMN07568852
NORP38
GCA_002401625.1ContigNVTO00000000SAMN07568927
NORP113
GCA_002401845.2ContigNVUG00000000SAMN07568909
NORP95
GCA_016765295.1ContigJAESQF000000000SAMN17309480
NORP219
GCA_016764675.1ContigJAESRI000000000SAMN17309509
NORP253
GCA_016763045.1ContigJAESUN000000000SAMN17309592
NORP342
GCA_002746395.1ContigNVXA00000000SAMN07568837
NORP23
GCA_002401945.1ContigNVUP00000000SAMN07568900
NORP86
GCA_002401045.1ContigNVSA00000000SAMN07568967
NORP153
GCA_002400675.1ContigNVQY00000000SAMN07568995
NORP181
GCA_002402045.2ContigNVUX00000000SAMN07568892
NORP78
GCA_016764785.1ContigJAESRG000000000SAMN17309507
NORP251
GCA_016764835.1ContigJAESRD000000000SAMN17309504
NORP247
GCA_016765235.1ContigJAESQH000000000SAMN17309482
NORP221
GCA_016764515.1ContigJAESRT000000000SAMN17309520
NORP266
GCA_002732665.1ContigNVRN00000000SAMN07568980
NORP166
GCA_016763455.1ContigJAESTS000000000SAMN17309571
NORP320
GCA_002400595.1ContigNVQS00000000SAMN07569001
NORP187
GCA_016763425.1ContigJAESTU000000000SAMN17309573
NORP322
GCA_016764285.1ContigJAESSC000000000SAMN17309529
NORP275
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NORP138
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NORP295
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NORP291
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NORP244
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NORP340
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NORP96
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NORP158
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NORP131
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NORP218
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NORP80
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NORP165
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NORP49
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NORP40
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NORP233
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NORP259
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NORP16
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NORP258
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NORP193
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NORP89
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NORP349
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NORP117
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NORP341
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NORP220
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NORP249
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NORP332
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NORP299
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NORP111
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NORP317
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NORP76
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NORP239
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NORP330
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NORP261
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NORP335
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NORP212
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NORP277
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NORP289
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NORP284
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NORP32
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NORP223
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NORP139
GCA_002400825.1ScaffoldNVRI00000000SAMN07568985
NORP171
GCA_002401565.1ContigNVTL00000000SAMN07568930
NORP116
GCA_002732845.1ContigNVSZ00000000SAMN07568942
NORP128
GCA_002746255.1ContigNVWO00000000SAMN07568849
NORP35
GCA_016763915.1ContigJAESSX000000000SAMN17309550
NORP298
GCA_002402195.1ContigNVVL00000000SAMN07568878
NORP64
GCA_002732685.1ContigNVRS00000000SAMN07568975
NORP161
GCA_002732605.1ContigNVRH00000000SAMN07568986
NORP172
GCA_002732905.1ScaffoldNVTC00000000SAMN07568939
NORP125
GCA_002733605.1ContigNVWK00000000SAMN07568853
NORP39
GCA_002733805.1ContigNVXG00000000SAMN07568831
NORP17
GCA_002733485.1ContigNVVU00000000SAMN07568869
NORP55
GCA_002733495.1ContigNVVV00000000SAMN07568868
NORP54
GCA_002733385.1ScaffoldNVVO00000000SAMN07568875
NORP61
GCA_002733905.1ContigNVXK00000000SAMN07568827
NORP13
GCA_016763315.1ContigJAESTZ000000000SAMN17309578
NORP327
GCA_016763185.1ContigJAESUG000000000SAMN17309585
NORP334
GCA_016765135.1ContigJAESQN000000000SAMN17309488
NORP227
GCA_016765255.1ContigJAESQI000000000SAMN17309483
NORP222
GCA_002733735.2ContigNVWT00000000SAMN07568844
NORP30
GCA_016763475.1ContigJAESTV000000000SAMN17309574
NORP323
GCA_002401285.1ScaffoldNVSQ00000000SAMN07568951
NORP137
GCA_002401295.1ContigNVSR00000000SAMN07568950
NORP136
GCA_016764275.1ContigJAESSD000000000SAMN17309530
NORP276
GCA_016764995.1ContigJAESQU000000000SAMN17309495
NORP237
GCA_016763035.1ContigJAESUO000000000SAMN17309593
NORP343
GCA_002400575.1ContigNVQR00000000SAMN07569002
NORP188
GCA_002402175.1ContigNVVJ00000000SAMN07568880
NORP66
GCA_002401885.1ContigNVUL00000000SAMN07568904
NORP90
GCA_002746215.1ScaffoldNVWI00000000SAMN07568855
NORP41
GCA_002732765.1ContigNVSK00000000SAMN07568957
NORP143
GCA_016764815.1ContigJAESRC000000000SAMN17309503
NORP246
GCA_002732675.1ContigNVRR00000000SAMN07568976
NORP162
GCA_016765515.1ContigJAESPT000000000SAMN17309468
NORP203
GCA_016764355.1ContigJAESSA000000000SAMN17309527
NORP273
GCA_016763835.1ContigJAESTA000000000SAMN17309553
NORP302
GCA_002732585.1ContigNVRA00000000SAMN07568993
NORP179
GCA_002733865.1ContigNVXM00000000SAMN07568825
NORP11
GCA_016764975.1ContigJAESQV000000000SAMN17309496
NORP238
GCA_002733055.1ContigNVUC00000000SAMN07568913
NORP99
GCA_002733155.1ContigNVUO00000000SAMN07568901
NORP87
GCA_002732975.1ScaffoldNVTP00000000SAMN07568926
NORP112
GCA_002732645.1ContigNVRL00000000SAMN07568982
NORP168
GCA_002732525.1ContigNVQK00000000SAMN07569009
NORP195
GCA_002733945.2ContigNVXO00000000SAMN07568823
NORP9
GCA_016764205.1ContigJAESSH000000000SAMN17309534
NORP280
GCA_002733215.1ContigNVUY00000000SAMN07568891
NORP77
GCA_002733355.1ContigNVVN00000000SAMN07568876
NORP62
GCA_002733205.1ContigNVUW00000000SAMN07568893
NORP79
GCA_002732875.1ContigNVTA00000000SAMN07568941
NORP127
GCA_002732825.1ContigNVST00000000SAMN07568948
NORP134
GCA_016765055.1ContigJAESQR000000000SAMN17309492
NORP234
GCA_002746365.1ContigNVWZ00000000SAMN07568838
NORP24
GCA_002401765.2ContigNVTY00000000SAMN07568917
NORP103
GCA_002401265.1ContigNVSN00000000SAMN07568954
NORP140
GCA_002401535.1ContigNVTI00000000SAMN07568933
NORP119
GCA_002401375.2ContigNVSX00000000SAMN07568944
NORP130
GCA_002400515.1ContigNVQP00000000SAMN07569004
NORP190
GCA_016763555.1ContigJAESTM000000000SAMN17309565
NORP314
GCA_002747015.1ContigNVXI00000000SAMN07568829
NORP15
GCA_002401135.1ContigNVSF00000000SAMN07568962
NORP148
GCA_002746295.2ContigNVWS00000000SAMN07568845
NORP31
GCA_002401225.1ContigNVSM00000000SAMN07568955
NORP141
SRA Data Details
ParameterValue
Data volume, Gbases142
Data volume, Mbytes88861

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