wetland metagenome (ID 338276) - BioProject

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Accession: PRJNA338276 ID: 338276

wetland metagenome

Old Woman Creek wetland metagenomic sequencing

The objective of the research in the Old Woman Creek wetland is to gain an understanding of the biogeochemical and microbial factors impacting methane cycling along temperate, freshwater wetland gradients.

Accession	PRJNA338276
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	wetland metagenome[Taxonomy ID: 1325974] unclassified sequences; metagenomes; ecological metagenomes; wetland metagenome
Submission	Registration date: 16-Aug-2017 The Ohio State University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2775
WGS master	115
SRA Experiments	111
Protein Sequences	16004
Other datasets
BioSample	225
Assembly	115

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

14
101
115

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_015712185.1	JADDYF000000000	SAMN16294745	Aug_T1_C1_D5_161	Bacteroidales bacterium
GCA_028683055.1	JAJRAA000000000	SAMN23829999	OWC_0000	Candidatus Helarchaeota archaeon
GCA_028683015.1	JAJRAC000000000	SAMN23830001	OWC_0002	Candidatus Methanomethyliaceae archaeon
GCA_028682975.1	JAJRAD000000000	SAMN23830002	OWC_0003	Candidatus Methanomethyliaceae archaeon
GCA_028683025.1	JAJRAB000000000	SAMN23830000	OWC_0001	Candidatus Methanomethylicus sp.
GCA_028679855.1	JAJRAP000000000	SAMN23830014	OWC_0015	Candidatus Methanoperedens sp.
GCA_028682955.1	JAJRAF000000000	SAMN23830004	OWC_0005	Methanobacteriaceae archaeon
GCA_028679495.1	JAJRBK000000000	SAMN23830035	OWC_0036	Methanobacteriota archaeon
GCA_028679475.1	JAJRBJ000000000	SAMN23830034	OWC_0035	Methanobacteriota archaeon
GCA_028682985.1	JAJRAE000000000	SAMN23830003	OWC_0004	Methanobacterium sp.
GCA_028679365.1	JAJRBR000000000	SAMN23830042	OWC_0043	Methanolinea sp.
GCA_028679985.1	JAJRAH000000000	SAMN23830006	OWC_0007	Methanomassiliicoccales archaeon
GCA_028679975.1	JAJRAI000000000	SAMN23830007	OWC_0008	Methanomassiliicoccales archaeon
GCA_028679945.1	JAJRAJ000000000	SAMN23830008	OWC_0009	Methanomassiliicoccales archaeon
GCA_028679935.1	JAJRAL000000000	SAMN23830010	OWC_0011	Methanomassiliicoccales archaeon
GCA_028679905.1	JAJRAM000000000	SAMN23830011	OWC_0012	Methanomassiliicoccales archaeon
GCA_028679885.1	JAJRAO000000000	SAMN23830013	OWC_0014	Methanomassiliicoccales archaeon
GCA_028682925.1	JAJRAG000000000	SAMN23830005	OWC_0006	Methanomassiliicoccales archaeon
GCA_028682915.1	JAJRAN000000000	SAMN23830012	OWC_0013	Methanomassiliicoccales archaeon
GCA_028682895.1	JAJRAK000000000	SAMN23830009	OWC_0010	Methanomassiliicoccales archaeon
GCA_028678965.1	JAJRCM000000000	SAMN23830063	OWC_0064	Methanomicrobiales archaeon
GCA_028678905.1	JAJRCO000000000	SAMN23830065	OWC_0066	Methanomicrobiales archaeon
GCA_028678885.1	JAJRCP000000000	SAMN23830066	OWC_0067	Methanomicrobiales archaeon
GCA_028678875.1	JAJRCQ000000000	SAMN23830067	OWC_0068	Methanomicrobiales archaeon
GCA_028678865.1	JAJRCN000000000	SAMN23830064	OWC_0065	Methanomicrobiales archaeon
GCA_028678855.1	JAJRCR000000000	SAMN23830068	OWC_0069	Methanomicrobiales archaeon
GCA_028678815.1	JAJRCS000000000	SAMN23830069	OWC_0070	Methanomicrobiales archaeon
GCA_028678795.1	JAJRCW000000000	SAMN23830073	OWC_0074	Methanomicrobiales archaeon
GCA_028678805.1	JAJRCT000000000	SAMN23830070	OWC_0071	Methanomicrobiales archaeon
GCA_028678765.1	JAJRCU000000000	SAMN23830071	OWC_0072	Methanomicrobiales archaeon
GCA_028678745.1	JAJRCV000000000	SAMN23830072	OWC_0073	Methanomicrobiales archaeon
GCA_028678735.1	JAJRCX000000000	SAMN23830074	OWC_0075	Methanomicrobiales archaeon
GCA_028678715.1	JAJRCY000000000	SAMN23830075	OWC_0076	Methanomicrobiales archaeon
GCA_028678695.1	JAJRCZ000000000	SAMN23830076	OWC_0077	Methanomicrobiales archaeon
GCA_028678665.1	JAJRDA000000000	SAMN23830077	OWC_0078	Methanomicrobiales archaeon
GCA_028678645.1	JAJRDB000000000	SAMN23830078	OWC_0079	Methanomicrobiales archaeon
GCA_028678635.1	JAJRDC000000000	SAMN23830079	OWC_0080	Methanomicrobiales archaeon
GCA_028678605.1	JAJRDD000000000	SAMN23830080	OWC_0081	Methanomicrobiales archaeon
GCA_028678595.1	JAJRDE000000000	SAMN23830081	OWC_0082	Methanomicrobiales archaeon
GCA_028678575.1	JAJRDG000000000	SAMN23830083	OWC_0084	Methanomicrobiales archaeon
GCA_028678555.1	JAJRDF000000000	SAMN23830082	OWC_0083	Methanomicrobiales archaeon
GCA_028678505.1	JAJRDH000000000	SAMN23830084	OWC_0085	Methanomicrobiales archaeon
GCA_028678475.1	JAJRDI000000000	SAMN23830085	OWC_0086	Methanomicrobiales archaeon
GCA_028679035.1	JAJRCL000000000	SAMN23830062	OWC_0063	Methanomicrobiales archaeon
GCA_028678985.1	JAJRCK000000000	SAMN23830061	OWC_0062	Methanomicrobiales archaeon
GCA_028678955.1	JAJRCI000000000	SAMN23830059	OWC_0060	Methanoregula sp.
GCA_028678975.1	JAJRCJ000000000	SAMN23830060	OWC_0061	Methanoregula sp.
GCA_028679255.1	JAJRBX000000000	SAMN23830048	OWC_0049	Methanoregula sp.
GCA_028679225.1	JAJRCC000000000	SAMN23830053	OWC_0054	Methanoregula sp.
GCA_028679215.1	JAJRBY000000000	SAMN23830049	OWC_0050	Methanoregula sp.
GCA_028679185.1	JAJRBZ000000000	SAMN23830050	OWC_0051	Methanoregula sp.
GCA_028679175.1	JAJRCA000000000	SAMN23830051	OWC_0052	Methanoregula sp.
GCA_028679155.1	JAJRCB000000000	SAMN23830052	OWC_0053	Methanoregula sp.
GCA_028679125.1	JAJRCG000000000	SAMN23830057	OWC_0058	Methanoregula sp.
GCA_028679115.1	JAJRCD000000000	SAMN23830054	OWC_0055	Methanoregula sp.
GCA_028679065.1	JAJRCH000000000	SAMN23830058	OWC_0059	Methanoregula sp.
GCA_028679075.1	JAJRCF000000000	SAMN23830056	OWC_0057	Methanoregula sp.
GCA_028679055.1	JAJRCE000000000	SAMN23830055	OWC_0056	Methanoregula sp.
GCA_028679535.1	JAJRBN000000000	SAMN23830038	OWC_0039	Methanoregulaceae archaeon
GCA_028679355.1	JAJRBT000000000	SAMN23830044	OWC_0045	Methanoregulaceae archaeon
GCA_028679315.1	JAJRBU000000000	SAMN23830045	OWC_0046	Methanoregulaceae archaeon
GCA_028679325.1	JAJRBS000000000	SAMN23830043	OWC_0044	Methanoregulaceae archaeon
GCA_028679295.1	JAJRBW000000000	SAMN23830047	OWC_0048	Methanoregulaceae archaeon
GCA_028679275.1	JAJRBV000000000	SAMN23830046	OWC_0047	Methanoregulaceae archaeon
GCA_028679435.1	JAJRBO000000000	SAMN23830039	OWC_0040	Methanoregulaceae archaeon
GCA_028679405.1	JAJRBP000000000	SAMN23830040	OWC_0041	Methanoregulaceae archaeon
GCA_028679385.1	JAJRBQ000000000	SAMN23830041	OWC_0042	Methanoregulaceae archaeon
GCA_002256665.1	NOLH00000000	SAMN05908754	ASM2	Methanosaeta sp. ASM2
GCA_002256715.1	NOLE00000000	SAMN05908755	ASO1	Methanosaeta sp. ASO1
GCA_002256605.1	NOLF00000000	SAMN05908752	ASP1-1	Methanosaeta sp. ASP1-1
GCA_002256645.1	NOLG00000000	SAMN05908753	ASP1-2	Methanosaeta sp. ASP1-2
GCA_002256575.1	NOLD00000000	SAMN05908749	NSM2	Methanosaeta sp. NSM2
GCA_002256595.1	NOLC00000000	SAMN05908746	NSP1	Methanosaeta sp. NSP1
GCA_028679455.1	JAJRBM000000000	SAMN23830037	OWC_0038	Methanospirillum sp.
GCA_028679485.1	JAJRBL000000000	SAMN23830036	OWC_0037	Methanospirillum sp.
GCA_028682845.1	JAJRAT000000000	SAMN23830018	OWC_0019	Methanothrix sp.
GCA_028682835.1	JAJRAV000000000	SAMN23830020	OWC_0021	Methanothrix sp.
GCA_028679545.1	JAJRBI000000000	SAMN23830033	OWC_0034	Methanothrix sp.
GCA_028679875.1	JAJRAW000000000	SAMN23830021	OWC_0022	Methanothrix sp.
GCA_028679795.1	JAJRAU000000000	SAMN23830019	OWC_0020	Methanothrix sp.
GCA_028679775.1	JAJRAX000000000	SAMN23830022	OWC_0023	Methanothrix sp.
GCA_028679745.1	JAJRAY000000000	SAMN23830023	OWC_0024	Methanothrix sp.
GCA_028679735.1	JAJRAZ000000000	SAMN23830024	OWC_0025	Methanothrix sp.
GCA_028679705.1	JAJRBA000000000	SAMN23830025	OWC_0026	Methanothrix sp.
GCA_028679675.1	JAJRBC000000000	SAMN23830027	OWC_0028	Methanothrix sp.
GCA_028679665.1	JAJRBB000000000	SAMN23830026	OWC_0027	Methanothrix sp.
GCA_028679655.1	JAJRBD000000000	SAMN23830028	OWC_0029	Methanothrix sp.
GCA_028679635.1	JAJRBG000000000	SAMN23830031	OWC_0032	Methanothrix sp.
GCA_028679615.1	JAJRBE000000000	SAMN23830029	OWC_0030	Methanothrix sp.
GCA_028679595.1	JAJRBH000000000	SAMN23830032	OWC_0033	Methanothrix sp.
GCA_028679575.1	JAJRBF000000000	SAMN23830030	OWC_0031	Methanothrix sp.
GCA_028679835.1	JAJRAQ000000000	SAMN23830015	OWC_0016	Methanotrichaceae archaeon
GCA_028679815.1	JAJRAR000000000	SAMN23830016	OWC_0017	Methanotrichaceae archaeon
GCA_028682875.1	JAJRAS000000000	SAMN23830017	OWC_0018	Methanotrichaceae archaeon
GCA_028748635.1	JAJRDQ000000000	SAMN23830093	OWC_0094	Methylococcaceae bacterium
GCA_028748765.1	JAJRDW000000000	SAMN23830099	OWC_0102	Methylococcaceae bacterium
GCA_028748745.1	JAJRDX000000000	SAMN23830100	OWC_0103	Methylococcaceae bacterium
GCA_028748725.1	JAJRDY000000000	SAMN23830101	OWC_0104	Methylococcaceae bacterium
GCA_028748705.1	JAJRDV000000000	SAMN23830098	OWC_0101	Methylococcaceae bacterium
GCA_028748685.1	JAJRDU000000000	SAMN23830097	OWC_0100	Methylococcaceae bacterium
GCA_028748665.1	JAJRDT000000000	SAMN23830096	OWC_0097	Methylococcaceae bacterium
GCA_028678435.1	JAJRDM000000000	SAMN23830089	OWC_0090	Methylococcaceae bacterium
GCA_028678445.1	JAJRDJ000000000	SAMN23830086	OWC_0087	Methylococcaceae bacterium
GCA_028678415.1	JAJRDK000000000	SAMN23830087	OWC_0088	Methylococcaceae bacterium
GCA_028678395.1	JAJRDL000000000	SAMN23830088	OWC_0089	Methylococcaceae bacterium
GCA_028678375.1	JAJRDP000000000	SAMN23830092	OWC_0093	Methylococcaceae bacterium
GCA_028678345.1	JAJRDS000000000	SAMN23830095	OWC_0096	Methylococcaceae bacterium
GCA_028678335.1	JAJRDR000000000	SAMN23830094	OWC_0095	Methylococcaceae bacterium
GCA_028678315.1	JAJRDZ000000000	SAMN23830102	OWC_0105	Methylococcaceae bacterium
GCA_028678515.1	JAJRDO000000000	SAMN23830091	OWC_0092	Methylococcaceae bacterium
GCA_028678485.1	JAJRDN000000000	SAMN23830090	OWC_0091	Methylococcaceae bacterium
GCA_002256705.1	NQJI00000000	SAMN05908750	NSM2-1	Methylococcaceae bacterium NSM2-1
GCA_002256735.1	NQJJ00000000	SAMN05908751	NSO1	Methylococcaceae bacterium NSO1
GCA_002256465.1	NQJG00000000	SAMN05908747	NSP1-1	Methylococcaceae bacterium NSP1-1
GCA_002256685.1	NQJH00000000	SAMN05908748	NSP1-2	Methylococcaceae bacterium NSP1-2

SRA Data Details

Parameter	Value
Data volume, Gbases	488
Data volume, Tbytes	0.23

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wetland metagenome

Old Woman Creek wetland metagenomic sequencing

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