sponge metagenome (ID 326328) - BioProject

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Accession: PRJNA326328 ID: 326328

sponge metagenome

sponge metagenome Genome sequencing and assembly

approach of a hybrid assembly of PacBio and Illumina metagenomic sequences of the complex metagenome of Aplysina aerophoba with the aim of binning microbial symbiont genomes

Accession	PRJNA326328
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	sponge metagenome[Taxonomy ID: 1163772] unclassified sequences; metagenomes; organismal metagenomes; sponge metagenome
Publications	Slaby BM et al., "Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization.", ISME J, 2017 Nov;11(11):2465-2478
Submission	Registration date: 1-Aug-2017 GEOMAR Helmholtz Centre for Ocean Research Kiel
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6249
WGS master	37
Publications
PubMed	1
PMC	1
Other datasets
BioSample	38
Assembly	37

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

37
37

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_002238705.1	MPMW00000000	SAMN05959517	bin61	Acidobacteria bacterium bin61
GCA_002238565.1	MPMP00000000	SAMN05959510	bin36	Albidovulum sp. bin36
GCA_002238645.1	MPMT00000000	SAMN05959514	bin52	Alphaproteobacteria bacterium bin52
GCA_002238885.1	MPNF00000000	SAMN05959526	bin95	Alphaproteobacteria bacterium bin95
GCA_002238905.1	MPNG00000000	SAMN05959527	bin98	Alphaproteobacteria bacterium bin98
GCA_002238605.1	MPMR00000000	SAMN05959512	bin43	BD2-11 clade cluster bacterium bin43
GCA_002238555.1	MPMO00000000	SAMN05959509	bin34	Caldilineaceae bacterium bin34
GCA_002238445.1	MPML00000000	SAMN05959508	bin5	Caldilineaceae bacterium bin5
GCA_002238625.1	MPMS00000000	SAMN05959513	bin44	Candidatus Poribacteria bacterium bin44
GCA_002238745.1	MPMY00000000	SAMN05959519	bin70	Candidatus Poribacteria bacterium bin70
GCA_002239025.1	MPNM00000000	SAMN05959533	bin125	Chloroflexi bacterium bin125
GCA_002238485.1	MPMG00000000	SAMN05958607	bin20	Chloroflexi bacterium bin20
GCA_002238435.1	MPMK00000000	SAMN05959507	bin9	Cyanobacteria bacterium bin9
GCA_002239065.1	MPNO00000000	SAMN05959535	bin129	Defluviicoccus sp. bin129
GCA_002238415.1	MPMI00000000	SAMN05959505	bin18	Desulfurellaceae bacterium bin18
GCA_002238525.1	MPMN00000000	SAMN05959502	bin25	Flavobacteriaceae bacterium bin25
GCA_002238665.1	MPMU00000000	SAMN05959515	bin55	Gammaproteobacteria bacterium bin55
GCA_002238865.1	MPNE00000000	SAMN05959525	bin94	Gemmatimonadetes bacterium bin94
GCA_002238585.1	MPMQ00000000	SAMN05959511	bin40	Kistimonas sp. bin40
GCA_002238965.1	MPNJ00000000	SAMN05959530	bin107	Nitrospinae bacterium bin107
GCA_002238765.1	MPMZ00000000	SAMN05959520	bin75	Nitrospira sp. bin75
GCA_002238945.1	MPNI00000000	SAMN05959529	bin106	Proteobacteria bacterium bin106
GCA_002239085.1	MPNP00000000	SAMN05959536	bin131	Rhodobacteraceae bacterium bin131
GCA_002238725.1	MPMX00000000	SAMN05959518	bin65	Rhodospirillaceae bacterium bin65
GCA_002238805.1	MPNB00000000	SAMN05959522	bin80	Rhodothermaceae bacterium bin80
GCA_002239045.1	MPNN00000000	SAMN05959534	bin127	SAR202 cluster bacterium bin127
GCA_002238425.1	MPMJ00000000	SAMN05959506	bin16	SAR202 cluster bacterium bin16
GCA_002238505.1	MPMM00000000	SAMN05959503	bin22	SAR202 cluster bacterium bin22
GCA_002238825.1	MPNC00000000	SAMN05959523	bin87	SAR202 cluster bacterium bin87
GCA_002238855.1	MPND00000000	SAMN05959524	bin90	SAR202 cluster bacterium bin90
GCA_002238925.1	MPNH00000000	SAMN05959528	bin103	Spirochaetaceae bacterium bin103
GCA_002239005.1	MPNL00000000	SAMN05959532	bin119	Truepera sp. bin119
GCA_002238465.1	MPMH00000000	SAMN05959504	bin63	bacterium EC214 bin63
GCA_002238685.1	MPMV00000000	SAMN05959516	bin56	bacterium EF100-94H03 bin56
GCA_002238785.1	MPNA00000000	SAMN05959521	bin76	bacterium OM1 bin76
GCA_002238985.1	MPNK00000000	SAMN05959531	bin110	bacterium TK85 bin110
GCA_002239105.1	MPNQ00000000	SAMN05959537	bin134	marine group bacterium Sva0996 bin134

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sponge metagenome

sponge metagenome Genome sequencing and assembly

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