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Links from Nucleotide

Accession: PRJNA313452 ID: 313452

Enterococcus

Multiple species of Enterococcus Genome sequencing and assembly

Multiple species of Enterococcus Genome sequencing and assembly
AccessionPRJNA313452
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismEnterococcus[Taxonomy ID: 1350]
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Grants
  • "Genomics of bacterial pathogens: host response, persistence and transmission" (Grant ID U19 AI110818, National Institute of Allergy and Infectious Diseases Extramural Activities)
SubmissionRegistration date: 16-May-2017
Broad Institute
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)856
WGS master93
Genomic DNA8
SRA Experiments116
Protein Sequences217409
Other datasets
BioSample138
Assembly101
Assembly details:
Assembly levelNumber of Assemblies
8
81
12
101
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_002174365.1ScaffoldNIBL00000000
SAMN04634068
2D5_DIV0622
GCA_002141415.1ScaffoldNGMV00000000
SAMN04634023
8C4_DIV03288
GCA_002141395.1ScaffoldNGMU00000000
SAMN04634022
8A4_DIV03286
GCA_002141205.1ScaffoldNGMP00000000
SAMN04634029
2A11_DIV0231
GCA_002140985.1ScaffoldNGMX00000000
SAMN04633996
9F2_4866
GCA_002140925.1ScaffoldNGMW00000000
SAMN04633994
9A2_4861
GCA_002140345.1ScaffoldNGMY00000000
SAMN04634061
11D3_DIV0676_a
GCA_002140335.1ScaffoldNGMZ00000000
SAMN04634034
11D3_DIV0676
GCA_002140315.1ScaffoldNGMB00000000
SAMN04634036
11C6_DIV0699
GCA_002140295.1ScaffoldNGMC00000000
SAMN04634057
11B6_DIV0698
GCA_002140255.1ScaffoldNGMD00000000
SAMN04634054
11B10_MSG5005
GCA_002140595.1ScaffoldNGLM00000000
SAMN04634033
2G6_DIV0578
GCA_002140235.1ScaffoldNGMG00000000
SAMN04634051
10E2_DIV0373
GCA_002140215.1ScaffoldNGMH00000000
SAMN04634052
10B2_DIV0370
GCA_002140555.1ScaffoldNGLQ00000000
SAMN04634030
2D4_DIV0473
GCA_002140535.1ScaffoldNGLR00000000
SAMN04634040
2B3_DIV0609
GCA_002140515.1ScaffoldNGLU00000000
SAMN04634011
1C8_DIV0465
GCA_002140475.1ScaffoldNGLV00000000
SAMN04634041
1B3_DIV609
GCA_002140455.1ScaffoldNGLX00000000
SAMN04634014
1A3_DIV0608
GCA_002140435.1ScaffoldNGLW00000000
SAMN04634031
1B12_DIV0542
GCA_002140415.1ScaffoldNGML00000000
SAMN04634055
11F9_MSG5001_a
GCA_002140385.1ScaffoldNGMI00000000
SAMN04634035
11F4_DIV0686
GCA_002140375.1ScaffoldNGMA00000000
SAMN04634039
11F10_MSG5009
GCA_002140955.1ScaffoldNGKT00000000
SAMN04634086
9B11__DIV0348
GCA_002140895.1ScaffoldNGKV00000000
SAMN04634025
8E4_DIV03290
GCA_002140865.1ScaffoldNGKW00000000
SAMN04634009
7H8_DIV0219
GCA_002141195.1ScaffoldNGLP00000000
SAMN04634073
2E6_DIV0576
GCA_002140805.1ScaffoldNGKZ00000000
SAMN04634008
7C8_DIV0219
GCA_002140735.1ScaffoldNGLD00000000
SAMN04634000
5A12_DIV0114
GCA_002141175.1ScaffoldNGLS00000000
SAMN04634013
1F1_DIV0518
GCA_002141135.1ScaffoldNGLT00000000
SAMN04634012
1D8_DIV0466
GCA_002141125.1ScaffoldNGMJ00000000
SAMN04634059
11F4_DIV0686_a
GCA_002141115.1ScaffoldNGMK00000000
SAMN04634038
11F9_MSG5001
GCA_002141075.1ScaffoldNGME00000000
SAMN04634046
10G4_DIV0391
GCA_002141035.1ScaffoldNGKR00000000
SAMN04634026
9H1_DIV04860
GCA_002141005.1ScaffoldNGMN00000000
SAMN04633993
9G1_4859
GCA_002141355.1ScaffoldNGLA00000000
SAMN04634004
6H2_DIV0141
GCA_002141335.1ScaffoldNGLB00000000
SAMN04634003
6F2_DIV0138
GCA_002141255.1ScaffoldNGLO00000000
SAMN04634072
2F7_DIV0583
GCA_002141435.1ScaffoldNGKS00000000
SAMN04634027
9B2_DIV04862
GCA_002174355.1ScaffoldNIBO00000000
SAMN04634005
6E3_DIV0147
GCA_002174445.1ScaffoldNIBM00000000
SAMN04634071
2H7_DIV0585
GCA_002174435.1ScaffoldNIBJ00000000
SAMN04634044
10E8_DIV0421
GCA_002216245.1ScaffoldNKCM00000000
SAMN04634047
10D4_DIV0388
GCA_017315995.1ScaffoldJAFLVS000000000
SAMN04634010
2B12_DIV0233
GCA_002140495.1ScaffoldNGMQ00000000
SAMN04634024
2A8_DIV0586
GCA_017316245.1ScaffoldJAFLVV000000000
SAMN18075563
DIV0164
GCA_017316205.1ScaffoldJAFLVW000000000
SAMN18075564
DIV0645b
GCA_002141315.1ScaffoldNGMS00000000
SAMN04634001
6B1_DIV0119
GCA_017315845.1ContigJAFLVZ000000000
SAMN18075566
DIV0208b
GCA_017316165.1ScaffoldJAFLVY000000000
SAMN18075565
DIV0204D
GCA_002140175.1ScaffoldNGMO00000000
SAMN04634043
10A9_DIV0425
GCA_002140245.1ScaffoldNGMF00000000
SAMN04634048
10F3_DIV0382
GCA_002148425.2ChromosomeSAMN04634065
12C11_DIV0727
GCA_002141085.1ScaffoldNGLY00000000
SAMN04634064
12E11_DIV0728
GCA_002174375.1ScaffoldNIBK00000000
SAMN04634067
12F9_DIV0723
GCA_002140575.1ScaffoldNGLN00000000
SAMN04634070
2F9_DIV0599
GCA_002140615.1ScaffoldNGLL00000000
SAMN04634069
2G9_DIV0600
GCA_002141235.1ScaffoldNGLK00000000
SAMN04634076
3C7_DIV0644
GCA_002141275.1ScaffoldNGLJ00000000
SAMN04634075
3C8_DIV0646
GCA_002141285.1ScaffoldNGLI00000000
SAMN04634015
3G1_DIV0629
GCA_002140635.1ScaffoldNGLH00000000
SAMN04634077
3G6_DIV0642
GCA_002140655.1ScaffoldNGLG00000000
SAMN04634074
3H8_DIV0648
GCA_002140695.1ScaffoldNGLF00000000
SAMN04634081
4E1_DIV0656
GCA_002140715.2ContigNGLE00000000
SAMN04634079
4G2_DIV0659
GCA_002140755.1ScaffoldNGLC00000000
SAMN04634082
5B3_DIV0040
GCA_002140775.1ScaffoldNGMR00000000
SAMN04633999
5B7_DIV0075
GCA_017377655.2ContigJAFREL000000000
SAMN18075561
665A
GCA_017377575.1ScaffoldJAFREM000000000
SAMN18075562
669A
GCA_002140795.1ScaffoldNGMT00000000
SAMN04633997
6C8_DIV0013
GCA_002174385.1ScaffoldNIBN00000000
SAMN04634066
6D12_DIV0197
GCA_002140835.1ScaffoldNGNB00000000
SAMN04634083
7D2_DIV0200
GCA_002140855.1ScaffoldNGKY00000000
SAMN04634018
7E2_DIV0204
GCA_002141365.2ChromosomeSAMN04634020
7F3_DIV0205
GCA_002174495.1ScaffoldNIBP00000000
SAMN04634084
8E11_MSG4843
GCA_002140915.1ScaffoldNGKU00000000
SAMN04634085
8G7_MSG3316
GCA_002174455.2ChromosomeSAMN04634088
9D6_DIV0238
GCA_002140975.2ChromosomeSAMN04634087
9E7_DIV0242
GCA_017377505.2ChromosomeSAMN09399626
DIV0212c
GCA_017316225.1ScaffoldJAFLVU000000000
SAMN18075560
DIV0242_7C1
GCA_017316125.1ContigJAFLWA000000000
SAMN09399640
DIV0660C
GCA_017316145.2ChromosomeSAMN09399639
DIV0849a
GCA_017316105.1ContigJAFLWD000000000
SAMN18075568
DIV0869a
GCA_017316305.2ChromosomeSAMN09399638
DIV1094
GCA_017377495.1ContigJAFREO000000000
SAMN18075570
DIV1271a
GCA_017316315.1ContigJAFLWG000000000
SAMN18075571
DIV1298c
GCA_017426705.2ChromosomeSAMN09399637
DIV2402
GCA_017316025.1ScaffoldJAFLVT000000000
SAMN18075559
MJM12
GCA_017315985.1ScaffoldJAFLVR000000000
SAMN18075558
MJM16
GCA_017315945.1ScaffoldJAFLWI000000000
SAMN18075572
MSG2901
GCA_002140675.2ContigNGNA00000000
SAMN04634080
4C2_DIV0658
GCA_017316065.1ContigJAFLWC000000000
SAMN18075567
DIV0861b
GCA_017316085.1ContigJAFLWE000000000
SAMN18075569
DIV0896c
GCA_017315965.1ScaffoldJAFLWJ000000000
SAMN18075573
DIV0015
GCA_017315815.1ScaffoldJAFLWM000000000
SAMN18075576
DIV0098
GCA_017315915.1ContigJAFLWK000000000
SAMN18075574
DIV0038b
GCA_017315905.1ScaffoldJAFLWL000000000
SAMN18075575
DIV0068
GCA_017315875.1ScaffoldJAFLWN000000000
SAMN18075577
DIV0648b
GCA_017315855.1ScaffoldJAFLWO000000000
SAMN18075578
DIV0657d
GCA_017316045.1ContigJAFLWP000000000
SAMN18075579
MSG3302
GCA_017316185.1ScaffoldJAFLVX000000000
SAMN09399635
DIV0080
SRA Data Details
ParameterValue
Data volume, Gbases145
Data volume, Mbytes81847

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