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Accession: PRJNA304678 ID: 304678

Streptococcus sp.

Streptococcus sp. Genome sequencing and assembly

See Genome Information for Streptococcus
Comparative genomics of Mitis Group Streptoccci causing infective endocarditis
AccessionPRJNA304678
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismStreptococcus sp.[Taxonomy ID: 1306]
Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp.
Publications
  • Rasmussen LH et al., "Whole genome sequencing as a tool for phylogenetic analysis of clinical strains of Mitis group streptococci.", Eur J Clin Microbiol Infect Dis, 2016 Oct;35(10):1615-25
  • Rasmussen LH et al., "Draft Genome Sequence of Type Strain Streptococcus gordonii ATCC 10558.", Genome Announc, 2016 Feb 18;4(1)
SubmissionRegistration date: 18-Dec-2015
Slagelse Hospital
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1136
WGS master41
Protein Sequences76069
Publications
PubMed2
PMC1
Other datasets
BioSample41
Assembly41
Assembly details:
Assembly levelNumber of Assemblies
22
19
41
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001469295.1ScaffoldLOBS00000000SAMN04306534
ATCC 10558
GCA_002096935.1ScaffoldNCVM00000000SAMN06705596
B_5756_13
GCA_002096925.1ContigNCVN00000000SAMN06705595
B_009152_10
GCA_002096915.1ScaffoldNCVL00000000SAMN06705597
OD_310347_11
GCA_002096895.1ContigNCVI00000000SAMN06705600
RH_17024_08
GCA_002096855.1ScaffoldNCVH00000000SAMN06705601
RH_17439_08
GCA_002096845.1ScaffoldNCVK00000000SAMN06705598
OD_317805_11
GCA_002096835.1ScaffoldNCVG00000000SAMN06705602
RH_43861_09
GCA_002096815.1ScaffoldNCVJ00000000SAMN06705599
RH_12363_08
GCA_002096775.1ContigNCVE00000000SAMN06705604
RH_50738_11
GCA_002096765.1ScaffoldNCVD00000000SAMN06705605
RH_777_07
GCA_002096755.1ScaffoldNCVF00000000SAMN06705603
RH_50275_09
GCA_002096735.1ScaffoldNCVC00000000SAMN06705606
RH_8961_10
GCA_002096695.1ContigNCVB00000000SAMN06705607
Y_052157_08
GCA_002096685.1ContigNCVA00000000SAMN06705608
RH_13585_10
GCA_002096675.1ContigNCUZ00000000SAMN06705609
RH_55407_11
GCA_002096655.1ContigNCUY00000000SAMN06705610
RH_70047_11
GCA_002096615.1ScaffoldNCUX00000000SAMN06705611
RH_9883_08
GCA_002096605.1ContigNCUS00000000SAMN06705616
B_19836_11
GCA_002096595.1ScaffoldNCUR00000000SAMN06705617
OD_311844-09
GCA_002096575.1ContigNCUQ00000000SAMN06705618
OD_321121_09
GCA_002096535.1ContigNCUN00000000SAMN06705621
RH_1735_08
GCA_002096525.1ContigNCUM00000000SAMN06705622
RH_34706_11
GCA_002096515.1ContigNCUP00000000SAMN06705619
OD_332610_07
GCA_002096495.1ContigNCUO00000000SAMN06705620
OD_336064_07
GCA_002096455.1ScaffoldNCUL00000000SAMN06705623
RH_50443_09
GCA_002096445.1ContigNCUK00000000SAMN06705624
RH_57980_07
GCA_002096435.1ScaffoldNCUI00000000SAMN06705626
Y_11577_11
GCA_002096415.1ScaffoldNCUH00000000SAMN06705627
OD_311286_11
GCA_002096375.1ContigNCUJ00000000SAMN06705625
RH_8610_08
GCA_002096365.1ContigNCUE00000000SAMN06705630
B_003802_10
GCA_002096355.1ContigNCUF00000000SAMN06705629
OD_326128_08
GCA_002096335.1ScaffoldNCUW00000000SAMN06705612
Y_5914_11
GCA_002096295.1ScaffoldNCUB00000000SAMN06705633
RH_48720_11
GCA_002096285.1ScaffoldNCUD00000000SAMN06705631
OD_339823_10
GCA_002096275.1ContigNCUG00000000SAMN06705628
OD_314165_09
GCA_002096255.1ContigNCUA00000000SAMN06705634
RH_49702_11
GCA_002096215.1ScaffoldNCUC00000000SAMN06705632
OD_348934_12
GCA_002096205.1ScaffoldNCUU00000000SAMN06705614
RH_5486_10
GCA_002096195.1ScaffoldNCUT00000000SAMN06705615
B_007274_11
GCA_002096175.1ScaffoldNCUV00000000SAMN06705613
OD_338919_11

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