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Accession: PRJNA231478 ID: 231478

Salmonella enterica subsp. enterica serovar Infantis

Salmonella enterica subsp. enterica serovar Infantis Genome sequencing and assembly

See Genome Information for Salmonella enterica
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Genomic Characterisation of Salmonella enterica Subspecies enterica Serovar Infantis Isolates from retail meat, human and food-producing animals
AccessionPRJNA231478
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica subsp. enterica serovar Infantis[Taxonomy ID: 595]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica serovar Infantis
SubmissionRegistration date: 13-Jan-2017
FDA
Relevancehuman, retail meat, and poultry
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1760
WGS master30
Protein Sequences132456
Other datasets
BioSample30
Assembly30
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
13
17
30
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002592315.1ContigJABN00000000SAMN02442741
CVM 23697
Salmonella enterica subsp. enterica serovar Infantis str. CVM 23697
GCA_002592295.1ContigJABM00000000SAMN02442740
CVM 22582
Salmonella enterica subsp. enterica serovar Infantis str. CVM 22582
GCA_002592275.1ScaffoldJABJ00000000SAMN02442737
CVM 818
Salmonella enterica subsp. enterica serovar Infantis str. CVM 818
GCA_002592255.1ScaffoldJABL00000000SAMN02442739
CVM 22577
Salmonella enterica subsp. enterica serovar Infantis str. CVM 22577
GCA_002592235.1ContigJABK00000000SAMN02442738
CVM 17958
Salmonella enterica subsp. enterica serovar Infantis str. CVM 17958
GCA_002592215.1ContigJABO00000000SAMN02442742
CVM 23729
Salmonella enterica subsp. enterica serovar Infantis str. CVM 23729
GCA_002592195.1ContigJABD00000000SAMN02442761
CVM N35495PS
Salmonella enterica subsp. enterica serovar Infantis str. CVM N35495PS
GCA_002592155.1ContigJABC00000000SAMN02442760
CVM N34868PS
Salmonella enterica subsp. enterica serovar Infantis str. CVM N34868PS
GCA_002592145.1ContigJABA00000000SAMN02442758
CVM N32599PS
Salmonella enterica subsp. enterica serovar Infantis str. CVM N32599PS
GCA_002592105.1ScaffoldJAAZ00000000SAMN02442757
CVM N32597PS
Salmonella enterica subsp. enterica serovar Infantis str. CVM N32597PS
GCA_002592095.1ContigJAAY00000000SAMN02442756
CVM N32590PS
Salmonella enterica subsp. enterica serovar Infantis str. CVM N32590PS
GCA_001970895.1ContigAZYS00000000SAMN02442743
CVM N13139
Salmonella enterica subsp. enterica serovar Infantis str. CVM N13139
GCA_001970985.1ContigJAAX00000000SAMN02442755
CVM N31594
Salmonella enterica subsp. enterica serovar Infantis str. CVM N31594
GCA_001970975.1ScaffoldJAAW00000000SAMN02442754
CVM N29379
Salmonella enterica subsp. enterica serovar Infantis str. CVM N29379
GCA_001970965.1ContigAZYT00000000SAMN02442744
CVM N15228
Salmonella enterica subsp. enterica serovar Infantis str. CVM N15228
GCA_001971055.1ContigJABE00000000SAMN02442762
CVM N35518
Salmonella enterica subsp. enterica serovar Infantis str. CVM N35518
GCA_001971045.1ScaffoldJABB00000000SAMN02442759
CVM N32760
Salmonella enterica subsp. enterica serovar Infantis str. CVM N32760
GCA_001952225.1ScaffoldJABH00000000SAMN02442765
CVM N42236
Salmonella enterica subsp. enterica serovar Infantis str. CVM N42236
GCA_001952215.1ContigJABG00000000SAMN02442764
CVM N41903
Salmonella enterica subsp. enterica serovar Infantis str. CVM N41903
GCA_001952205.1ContigJABI00000000SAMN02442766
CVM N42459
Salmonella enterica subsp. enterica serovar Infantis str. CVM N42459
GCA_001952165.1ScaffoldJABF00000000SAMN02442763
CVM N38848
Salmonella enterica subsp. enterica serovar Infantis str. CVM N38848
GCA_001951835.1ScaffoldAZNK00000000SAMN02442752
CVM N26093
Salmonella enterica subsp. enterica serovar Infantis str. CVM N26093
GCA_001951785.1ScaffoldAZNJ00000000SAMN02442753
CVM N29304
Salmonella enterica subsp. enterica serovar Infantis str. CVM N29304
GCA_001951775.1ContigJAAV00000000SAMN02442751
CVM N23791
Salmonella enterica subsp. enterica serovar Infantis str. CVM N23791
GCA_001951765.1ContigJAAT00000000SAMN02442749
CVM N23532
Salmonella enterica subsp. enterica serovar Infantis str. CVM N23532
GCA_001951755.1ScaffoldJAAS00000000SAMN02442748
CVM N20272
Salmonella enterica subsp. enterica serovar Infantis str. CVM N20272
GCA_001951705.1ContigJAAP00000000SAMN02442745
CVM N15773
Salmonella enterica subsp. enterica serovar Infantis str. CVM N15773
GCA_001951695.1ScaffoldJAAU00000000SAMN02442750
CVM N23771
Salmonella enterica subsp. enterica serovar Infantis str. CVM N23771
GCA_001951685.1ScaffoldJAAR00000000SAMN02442747
CVM N20078
Salmonella enterica subsp. enterica serovar Infantis str. CVM N20078
GCA_001951675.1ScaffoldJAAQ00000000SAMN02442746
CVM N19983
Salmonella enterica subsp. enterica serovar Infantis str. CVM N19983

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