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Accession: PRJNA928096 ID: 928096

Scomber japonicus isolate:fScoJap1 (chub mackerel)

Scomber japonicus isolate:fScoJap1 RefSeq Genome sequencing and assembly

See Genome Information for Scomber japonicus
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This project is a component of the Scomber japonicus (Pacific chub mackerel) genome fScoJap1
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5 additional projects are related by organism.
2 additional projects are components of the Scomber japonicus (Pacific chub mackerel) genome fScoJap1.
The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA912108). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
AccessionPRJNA928096
Data TypeRefSeq Genome sequencing and assembly
ScopeMonoisolate
OrganismScomber japonicus[Taxonomy ID: 13676]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Scomber; Scomber japonicus
PublicationsRhie A et al., "Towards complete and error-free genome assemblies of all vertebrate species.", Nature, 2021 Apr;592(7856):737-746
SubmissionRegistration date: 27-Dec-2022
Vertebrate Genomes Project
- G10K
- Rockefeller Vertebrate Genome Lab
RelevanceReference genome
Locus Tag PrefixPN404
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)34774
Transcript34390
Protein Sequences30506
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCF_027409825.1ChromosomeJAPYKA000000000
24
SAMN32224830
Scomber japonicus
Related GenBank Project
PRJNA912108 : Scomber japonicus (Pacific chub mackerel) genome fScoJap1, primary haplotype

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