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Accession: PRJNA902317 ID: 902317

Oryza glaberrima (African rice)

Oryza glaberrima RefSeq BioProject

See Genome Information for Oryza glaberrima
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This project is a component of the The Oryza Map Alignment Project is a comparative genomics project for all ten genome types in rice
This project is a component of the Comparison of transposable elements across the various genome types of the Oryza genus
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16 additional projects are related by organism.
16 additional projects are components of the The Oryza Map Alignment Project is a comparative genomics project for all ten genome types in rice.
15 additional projects are components of the Comparison of transposable elements across the various genome types of the Oryza genus.
The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA13765). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
AccessionPRJNA902317
Data TypeRefSeq Genome
ScopeMultiisolate
OrganismOryza glaberrima[Taxonomy ID: 4538]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima
PublicationsMariac C et al., "Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies.", Mol Ecol Resour, 2014 Nov;14(6):1103-13
SubmissionRegistration date: 16-Nov-2022
The Oryza Map Alignment Project (OMAP)
- Arizona Genomics Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)43834
Transcript43750
Protein Sequences36133
Publications
PubMed1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCF_000147395.1ChromosomeADWL00000000
13
SAMN02981267
Oryza glaberrima
Related GenBank Project
PRJNA13765 : One organism in the OMAP project to determine genome sequence of genome relatives of Oryza sativa

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