See
Genome Information for Oncorhynchus gorbuscha
The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA556728). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
| Accession | PRJNA726253 |
| Data Type | RefSeq Raw sequence reads |
| Scope | Multispecies |
| Organism | Oncorhynchus gorbuscha[Taxonomy ID: 8017] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus gorbuscha |
| Publications | - Christensen KA et al., "The pink salmon genome: Uncovering the genomic consequences of a two-year life cycle.", PLoS One, 2021;16(12):e0255752
- Dann SG et al., "Salmonid opsin sequences undergo positive selection and indicate an alternate evolutionary relationship in oncorhynchus.", J Mol Evol, 2004 Apr;58(4):400-12
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| Submission | Registration date: 10-Dec-2021
Fisheries and Oceans Canada |
| Related Resources | |
| Relevance | Fisheries, Cultural, and Environmental |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 110181 |
| Transcript | 91127 |
| Protein Sequences | 80318 |
| Publications |
| PubMed | 2 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related Project Category: RefseqGenbank
PRJNA556728 : Genome assembly of Pink salmon (Oncorhynchus gorbuscha)