Taeniopygia guttata (ID 558048) - BioProject

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Accession: PRJNA558048 ID: 558048

Taeniopygia guttata (zebra finch)

Taeniopygia guttata RefSeq Genome sequencing and assembly

See Genome Information for Taeniopygia guttata

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This project is a component of the Taeniopygia guttata (zebra finch) genome assembly, bTaeGut1

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70 additional projects are related by organism.

3 additional projects are components of the Taeniopygia guttata (zebra finch) genome assembly, bTaeGut1.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA489098). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA558048
Data Type	RefSeq Genome sequencing and assembly
Scope	Monoisolate
Organism	Taeniopygia guttata[Taxonomy ID: 59729] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia; Taeniopygia guttata
Publications (total 5) Less...	Formenti G et al., "Complete vertebrate mitogenomes reveal widespread repeats and gene duplications.", Genome Biol, 2021 Apr 29;22(1):120 More... Formenti G et al., "Complete vertebrate mitogenomes reveal widespread repeats and gene duplications.", Genome Biol, 2021 Apr 29;22(1):120 Rhie A et al., "Towards complete and error-free genome assemblies of all vertebrate species.", Nature, 2021 Apr;592(7856):737-746 Korlach J et al., "De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.", Gigascience, 2017 Oct 1;6(10):1-16 Warren WC et al., "The genome of a songbird.", Nature, 2010 Apr 1;464(7289):757-62 Wada K et al., "A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes.", Proc Natl Acad Sci U S A, 2006 Oct 10;103(41):15212-7 Less...
Submission	Registration date: 20-Dec-2018 Vertebrate Genomes Project - G10K
Related Resources	G10K Organization Vertebrate Genomes Project Bird B10K Project
Relevance	Model Organism
Locus Tag Prefix	FRX60

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	48368
Transcript	48129
Protein Sequences	41201
Publications
PubMed	5
PMC	5
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_003957565.2	Chromosome	RRCB00000000	42	SAMN02981239	Taeniopygia guttata

Related GenBank Project

PRJNA489098 : Taeniopygia guttata (zebra finch) genome sequencing and assembly, primary haplotype

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Taeniopygia guttata (zebra finch)

Taeniopygia guttata RefSeq Genome sequencing and assembly

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