See
Genome Information for Homo sapiens
The purpose of the project is to support the discovery and understanding of genetic variants that influence human disease. Specifically defined goals are (a) the discovery of single nucleotide variants at frequencies of 1% or higher in diverse populations, (b) even more comprehensive discovery (variants down to frequencies of 0.1 - 0.5%) in functional gene regions, and (c) discovery of structural variants, such as copy number variants, other insertions and deletions, and inversions, including sequence-level understanding of breakpoints.
The volume of data generated by 1000genomes project is unprecedented.
The data is accessible from two mirrored ftp sites
at
EBI and
NCBI.
Accession | PRJNA28889 |
Type | Umbrella project (Subtype:Funding initiative) |
Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
Publications | |
Submission | Registration date: 2-Mar-2008 1000 Genomes Consortium |
Related Resources | |
Project Data:
Resource Name | Number of Links |
---|
Sequence data |
SRA Experiments | 26701 |
Publications |
PubMed | 2 |
PMC | 2 |
Other datasets |
BioSample | 3059 |
Variation (dbVar) | 251404 |
Single Nucleotide Polymorphism (dbSNP) | 40806389 |
SRA Data DetailsParameter | Value |
---|
Data volume, Gbases | 317,547 |
Data volume, Tbytes | 222.89 |
The 1000 Genomes Project encompasses the following 6 sub-projects:
Project Type | Number of Projects |
Umbrella project | 3 |
|
Variation | 3 |
BioProject accession | Organism | Title |
---|
PRJNA28911 | Homo sapiens | 1000 Genomes Project Pilot 1 (low coverage sequencing of 180 Hapmap individuals from multiple populations. (1000 Genomes Project) | PRJNA28917 | Homo sapiens | 1000 Genomes Project Pilot 3. Exon re-sequencing from 1,000 genes in 1,000 individuals. (1000 Genomes Project) | PRJNA28919 | Homo sapiens | 1000 Genomes Project Pilot 2. High coverage sequencing of 2 Trios (6 individuals). (1000 Genomes Project) |
|