KCMC KPNEU1 (ID 464329) - BioProject

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Accession: PRJEB26616 ID: 464329

KCMC KPNEU1

Molecular characterisation of Klebsiella pneumoniae in Tanzania

Molecular characterisation of Klebsiella pneumoniae isolates from a tertiary referral hospital in Tanzania, in terms of MLST, K-type, and the presence of virulence and anti-microbial resistance genes.

Accession	PRJEB26616
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Publications	Sonda T et al., "Molecular epidemiology of virulence and antimicrobial resistance determinants in Klebsiella pneumoniae from hospitalised patients in Kilimanjaro, Tanzania.", Eur J Clin Microbiol Infect Dis, 2018 Oct;37(10):1901-1914
Submission	Registration date: 7-May-2018 Kilimanjaro Clinical Research Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	15960
WGS master	34
Publications
PubMed	1
Other datasets
BioSample	34
Assembly	34

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

34
34

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_900407255.1	OVED00000000	SAMEA4646320	KCRI-567C	Klebsiella michiganensis
GCA_900407165.1	OVDX00000000	SAMEA4646313	KCRI-40	Klebsiella michiganensis
GCA_900407115.1	OVDO00000000	SAMEA4646304	KCRI-259C	Klebsiella oxytoca
GCA_900407105.1	OVDV00000000	SAMEA4646306	KCRI-29	Klebsiella pneumoniae
GCA_900407045.1	OVDT00000000	SAMEA4646300	KCRI-17	Klebsiella pneumoniae
GCA_900407195.1	OVDZ00000000	SAMEA4646316	KCRI-50	Klebsiella pneumoniae
GCA_900407065.1	OVDL00000000	SAMEA4646305	KCRI-284D	Klebsiella pneumoniae
GCA_900407145.1	OVDS00000000	SAMEA4646308	KCRI-302	Klebsiella pneumoniae
GCA_900407095.1	OVDN00000000	SAMEA4646307	KCRI-293	Klebsiella pneumoniae
GCA_900407035.1	OVDJ00000000	SAMEA4646299	KCRI-16	Klebsiella pneumoniae
GCA_900407085.1	OVDK00000000	SAMEA4646303	KCRI-248	Klebsiella pneumoniae
GCA_900407185.1	OVDW00000000	SAMEA4646314	KCRI-404C	Klebsiella pneumoniae
GCA_900407205.1	OVEA00000000	SAMEA4646317	KCRI-51K	Klebsiella pneumoniae
GCA_900407215.1	OVEB00000000	SAMEA4646315	KCRI-41	Klebsiella pneumoniae
GCA_900407175.1	OVDY00000000	SAMEA4646312	KCRI-365	Klebsiella pneumoniae
GCA_900407155.1	OVDU00000000	SAMEA4646311	KCRI-350	Klebsiella pneumoniae
GCA_900407135.1	OVDQ00000000	SAMEA4646310	KCRI-320	Klebsiella pneumoniae
GCA_900407125.1	OVDR00000000	SAMEA4646309	KCRI-315	Klebsiella pneumoniae
GCA_900407265.1	OVEI00000000	SAMEA4646325	KCRI-79C	Klebsiella pneumoniae
GCA_900407235.1	OVEF00000000	SAMEA4646321	KCRI-576	Klebsiella pneumoniae
GCA_900407245.1	OVEE00000000	SAMEA4646319	KCRI-567B	Klebsiella pneumoniae
GCA_900407225.1	OVEC00000000	SAMEA4646318	KCRI-566A	Klebsiella pneumoniae
GCA_900407295.1	OVEJ00000000	SAMEA4646324	KCRI-74	Klebsiella pneumoniae
GCA_900407285.1	OVEG00000000	SAMEA4646323	KCRI-591	Klebsiella pneumoniae
GCA_900407275.1	OVEH00000000	SAMEA4646322	KCRI-585	Klebsiella pneumoniae
GCA_900407315.1	OVEK00000000	SAMEA4646327	KCRI-KLEB	Klebsiella pneumoniae
GCA_900407305.1	OVEL00000000	SAMEA4646326	KCRI-ADE	Klebsiella pneumoniae
GCA_900407005.1	OVDI00000000	SAMEA4646294	KCRI-110LF	Klebsiella pneumoniae
GCA_900407025.1	OVDH00000000	SAMEA4646297	KCRI-150C	Klebsiella pneumoniae
GCA_900406985.1	OVDE00000000	SAMEA4646296	KCRI-134	Klebsiella pneumoniae
GCA_900407015.1	OVDG00000000	SAMEA4646295	KCRI-131E	Klebsiella pneumoniae
GCA_900406995.1	OVDF00000000	SAMEA4646298	KCRI-152E	Klebsiella variicola
GCA_900407055.1	OVDP00000000	SAMEA4646302	KCRI-201B	Klebsiella variicola
GCA_900407075.1	OVDM00000000	SAMEA4646301	KCRI-198C	Klebsiella variicola

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KCMC KPNEU1

Molecular characterisation of Klebsiella pneumoniae in Tanzania

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