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Accession: PRJNA394943 ID: 394943

Solanum

potato genome resequencing

See Genome Information for Solanum tuberosum
About 30% of the wild species, and some accessions species of the cultivated species are polyploid, mostly allopolyploids that hinders effective SNP calls, so we examined diploids.
AccessionPRJNA394943
Data TypeGenome sequencing
ScopeMultispecies
OrganismSolanum[Taxonomy ID: 4107]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
PublicationsLi Y et al., "Genomic Analyses Yield Markers for Identifying Agronomically Important Genes in Potato.", Mol Plant, 2018 Mar 5;11(3):473-484
SubmissionRegistration date: 19-Jul-2017
Sichuan Agricultural University
Locus Tag PrefixCG464
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments201
Publications
PubMed1
Other datasets
BioSample201
SRA Data Details
ParameterValue
Data volume, Gbases1,558
Data volume, Tbytes0.69

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