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Accession: PRJNA390542 ID: 390542

gut metagenome

SMRT sequencing of an adult mouse gut microbiome

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This project is a component of the Multi-species bacterial DNA sequencing in support of DNA methylation binning and plasmid mapping in metagenomic samples
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6 additional projects are components of the Multi-species bacterial DNA sequencing in support of DNA methylation binning and plasmid mapping in metagenomic samples.
Fecal pellets from a male 12-week-old NOD/shiltj mouse were collected and SMRT sequenced using a 10kb library.
AccessionPRJNA390542
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismgut metagenome[Taxonomy ID: 749906]
unclassified sequences; metagenomes; organismal metagenomes; gut metagenome
SubmissionRegistration date: 6-Nov-2017
Icahn School of Medicine at Mount Sinai
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments6
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_002754755.1ScaffoldPDYJ00000000SAMN07237672
gut metagenome
SRA Data Details
ParameterValue
Data volume, Gbases18
Data volume, Mbytes59753

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