Listeria monocytogenes (ID 758963) - BioProject

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Accession: PRJNA758963 ID: 758963

Listeria monocytogenes

Genome Trakr Project: Rhode Island Department of Health

See Genome Information for Listeria monocytogenes

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This project is a component of the GenomeTrakr umbrella project for Listeria sp

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56 additional projects are components of the GenomeTrakr umbrella project for Listeria sp.

697 additional projects are related by organism.

Whole genome sequencing of cultured Listeria species as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA758963
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Listeria monocytogenes[Taxonomy ID: 1639] Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes
Submission	Registration date: 17-Sep-2021 Rhode Island State Health Laboratory
Related Resources	US Food and Drug Administration, Center for Food Safety and Nutrition \| Whole Genome Sequencing (WGS) Program Rhode Island Department of Health
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	29
SRA Experiments	40
Other datasets
BioSample	40
Assembly	29

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

29
29

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_030868475.1	ABLQJV000000000	SAMN35820595	FM23-207	Listeria innocua
GCA_029518535.1	ABLHUQ000000000	SAMN33989678	FM23-157	Listeria innocua
GCA_040086425.1	ABSUMQ000000000	SAMN41707787	FM24-102-3	Listeria innocua
GCA_040086235.1	ABSUML000000000	SAMN41707788	FM24-102-4	Listeria innocua
GCA_040085255.1	ABSUKL000000000	SAMN41707781	FM24-100-3	Listeria innocua
GCA_040085855.1	ABSULN000000000	SAMN41707780	FM24-100-2	Listeria innocua
GCA_040085845.1	ABSULO000000000	SAMN41707784	FM24-101-3	Listeria innocua
GCA_040086405.1	ABSUMP000000000	SAMN41707782	FM24-100-4	Listeria innocua
GCA_040085085.1	ABSUKE000000000	SAMN41707785	FM24-102-1	Listeria innocua
GCA_040085045.1	ABSUKD000000000	SAMN41707779	FM24-100-1	Listeria innocua
GCA_040085055.1	ABSUKC000000000	SAMN41707783	FM24-101-2	Listeria innocua
GCA_028558115.1	ABKOAB000000000	SAMN33211634	FM23-024	Listeria innocua
GCA_028194205.1	ABKJRA000000000	SAMN32857395	FM23-004-1	Listeria innocua
GCA_028194165.1	ABKJQY000000000	SAMN32857392	FM23-001	Listeria innocua
GCA_028194175.1	ABKJQZ000000000	SAMN32857393	FM23-002	Listeria innocua
GCA_021369935.1	ABENXD000000000	SAMN24657836	FM21-238	Listeria monocytogenes
GCA_020018155.1	ABCNGQ000000000	SAMN21461634	FM21-155	Listeria monocytogenes
GCA_020014315.1	ABCNED000000000	SAMN21461635	FM21-156	Listeria monocytogenes
GCA_020013535.1	ABCNDT000000000	SAMN21461632	FM21-153	Listeria monocytogenes
GCA_030993465.1	ABLUAQ000000000	SAMN36272316	FM23-228	Listeria monocytogenes
GCA_042492725.1	ABVOIQ000000000	SAMN43989433	FM24-271-1	Listeria monocytogenes
GCA_040523625.1	ABTIHS000000000	SAMN42337690	FM24-204-9	Listeria monocytogenes
GCA_040523565.1	ABTIHR000000000	SAMN42337689	FM24-204-1	Listeria monocytogenes
GCA_028096225.1	ABKHHU000000000	SAMN32857394	FM23-003	Listeria monocytogenes
GCA_028096335.1	ABKHHW000000000	SAMN32857397	FM23-005	Listeria monocytogenes
GCA_028096385.1	ABKHHV000000000	SAMN32857396	FM23-004-3	Listeria monocytogenes
GCA_028918425.1	ABKVUV000000000	SAMN33456533	FM23-086	Listeria monocytogenes
GCA_028878775.1	ABKUHK000000000	SAMN33456534	FM23-089	Listeria monocytogenes
GCA_028611265.1	ABKPKV000000000	SAMN33271116	PNUSAL016519	Listeria monocytogenes

SRA Data Details

Parameter	Value
Data volume, Gbases	7
Data volume, Mbytes	3711

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Listeria monocytogenes

Genome Trakr Project: Rhode Island Department of Health

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