Listeria monocytogenes (ID 368992) - BioProject

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Accession: PRJNA368992 ID: 368992

Listeria monocytogenes

GenomeTrakr Project: Michigan Department of Agriculture and Rural Development Geagley Laboratory

See Genome Information for Listeria monocytogenes

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This project is a component of the GenomeTrakr umbrella project for Listeria sp

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697 additional projects are related by organism.

56 additional projects are components of the GenomeTrakr umbrella project for Listeria sp.

Whole genome sequencing of cultured Listeria monocytogenes as part of the US Food and Drug Administration surveillance project for the rapid detection of foodborne contamination events.

Accession	PRJNA368992
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Listeria monocytogenes[Taxonomy ID: 1639] Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes
Submission	Registration date: 26-Mar-2019 FDA
Related Resources	Michigan Department of Agriculture and Rural Development Geagley Laboratory
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	326
SRA Experiments	454
Other datasets
BioSample	457
Assembly	326

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

140
140

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_038428695.1	ABRWAS000000000	SAMN41019427	23MDARD116	Listeria innocua
GCA_038429935.1	ABRWAM000000000	SAMN41019423	22MDARD0125	Listeria innocua
GCA_038428615.1	ABRWAO000000000	SAMN41019433	23MDARD176	Listeria innocua
GCA_038428715.1	ABRWAR000000000	SAMN34381160	23MDARD039	Listeria innocua
GCA_038428675.1	ABRWAQ000000000	SAMN41019435	23MDARD179	Listeria innocua
GCA_038428655.1	ABRWAP000000000	SAMN41019434	23MDARD178	Listeria innocua
GCA_038447345.1	ABRWJQ000000000	SAMN41060964	23MDARD113	Listeria innocua
GCA_038447175.1	ABRWJJ000000000	SAMN41060962	23MDARD110	Listeria innocua
GCA_038447235.1	ABRWJK000000000	SAMN41060973	24MDARD019	Listeria innocua
GCA_038447135.1	ABRWJM000000000	SAMN41060972	24MDARD009	Listeria innocua
GCA_038447365.1	ABRWJR000000000	SAMN41060965	23MDARD114	Listeria innocua
GCA_038447325.1	ABRWJP000000000	SAMN41060968	23MDARD177	Listeria innocua
GCA_038447255.1	ABRWJO000000000	SAMN41060976	24MDARD038	Listeria innocua
GCA_038447275.1	ABRWJN000000000	SAMN41060975	24MDARD037	Listeria innocua
GCA_038447295.1	ABRWJL000000000	SAMN41060974	24MDARD029	Listeria innocua
GCA_038473015.1	ABRWQN000000000	SAMN41060963	23MDARD112	Listeria innocua
GCA_039303625.1	ABRZOI000000000	SAMN41162365	23MDARD121	Listeria innocua
GCA_037355755.1	ABQTNI000000000	SAMN33566057	22MDARD0160	Listeria innocua
GCA_031473355.1	ABMHTS000000000	SAMN34381166	23MDARD045	Listeria innocua
GCA_031473475.1	ABMHTY000000000	SAMN34381171	23MDARD050	Listeria innocua
GCA_031473455.1	ABMHTU000000000	SAMN34381169	23MDARD048	Listeria innocua
GCA_031473435.1	ABMHTT000000000	SAMN34381168	23MDARD047	Listeria innocua
GCA_031473415.1	ABMHTX000000000	SAMN34381170	23MDARD049	Listeria innocua
GCA_031473395.1	ABMHTV000000000	SAMN34381167	23MDARD046	Listeria innocua
GCA_031503865.1	ABMJLL000000000	SAMN34381120	22MDARD0179	Listeria innocua
GCA_031503845.1	ABMJLI000000000	SAMN34381137	23MDARD016	Listeria innocua
GCA_031503805.1	ABMJLH000000000	SAMN34381136	23MDARD015	Listeria innocua
GCA_031503785.1	ABMJLF000000000	SAMN34381134	23MDARD013	Listeria innocua
GCA_031503765.1	ABMJLG000000000	SAMN34381135	23MDARD014	Listeria innocua
GCA_031503745.1	ABMJLD000000000	SAMN34381133	23MDARD012	Listeria innocua
GCA_031503725.1	ABMJLE000000000	SAMN34381116	22MDARD0175	Listeria innocua
GCA_031503705.1	ABMJLC000000000	SAMN34381132	23MDARD011	Listeria innocua
GCA_031503685.1	ABMJKY000000000	SAMN34381131	23MDARD010	Listeria innocua
GCA_031503665.1	ABMJKX000000000	SAMN34381124	23MDARD003	Listeria innocua
GCA_031503905.1	ABMJLM000000000	SAMN34381121	22MDARD0180	Listeria innocua
GCA_031503875.1	ABMJLK000000000	SAMN34381118	22MDARD0177	Listeria innocua
GCA_031503825.1	ABMJLJ000000000	SAMN34381117	22MDARD0176	Listeria innocua
GCA_031503065.1	ABMJJW000000000	SAMN34381144	23MDARD023	Listeria innocua
GCA_031503045.1	ABMJJV000000000	SAMN34381161	23MDARD040	Listeria innocua
GCA_031503005.1	ABMJJU000000000	SAMN34381159	23MDARD038	Listeria innocua
GCA_031502985.1	ABMJJS000000000	SAMN34381158	23MDARD037	Listeria innocua
GCA_031502965.1	ABMJJR000000000	SAMN34381152	23MDARD031	Listeria innocua
GCA_031503615.1	ABMJKW000000000	SAMN34381114	22MDARD0173	Listeria innocua
GCA_031503925.1	ABMJLN000000000	SAMN34381123	23MDARD002	Listeria innocua
GCA_032294805.1	ABNGFK000000000	SAMN37607837	23MDARD147	Listeria innocua
GCA_032294785.1	ABNGFJ000000000	SAMN37607850	23MDARD167	Listeria innocua
GCA_032294765.1	ABNGFI000000000	SAMN37607846	23MDARD163	Listeria innocua
GCA_032294745.1	ABNGFF000000000	SAMN37607845	23MDARD162	Listeria innocua
GCA_032294725.1	ABNGFH000000000	SAMN37607844	23MDARD161	Listeria innocua
GCA_032294705.1	ABNGFG000000000	SAMN37607843	23MDARD160	Listeria innocua
GCA_032294685.1	ABNGFE000000000	SAMN37607842	23MDARD152	Listeria innocua
GCA_032294665.1	ABNGFD000000000	SAMN37607841	23MDARD151	Listeria innocua
GCA_032294585.1	ABNGEY000000000	SAMN37607829	23MDARD100	Listeria innocua
GCA_032294645.1	ABNGEX000000000	SAMN37607839	23MDARD149	Listeria innocua
GCA_032294625.1	ABNGFC000000000	SAMN37607840	23MDARD150	Listeria innocua
GCA_030868815.1	ABLQKJ000000000	SAMN34381163	23MDARD042	Listeria innocua
GCA_030868795.1	ABLQKK000000000	SAMN34381180	23MDARD059	Listeria innocua
GCA_030868775.1	ABLQKG000000000	SAMN34381162	23MDARD041	Listeria innocua
GCA_030868855.1	ABLQKL000000000	SAMN34381164	23MDARD043	Listeria innocua
GCA_030868955.1	ABLQKI000000000	SAMN34381172	23MDARD051	Listeria innocua
GCA_030868975.1	ABLQKM000000000	SAMN34381182	23MDARD061	Listeria innocua
GCA_030868905.1	ABLQKN000000000	SAMN34381165	23MDARD044	Listeria innocua
GCA_030868315.1	ABLQJO000000000	SAMN37032561	23MDARD140	Listeria innocua
GCA_030868295.1	ABLQJP000000000	SAMN37032557	23MDARD136	Listeria innocua
GCA_030868275.1	ABLQJQ000000000	SAMN37032556	23MDARD135	Listeria innocua
GCA_030868255.1	ABLQJN000000000	SAMN37032565	23MDARD144	Listeria innocua
GCA_030868235.1	ABLQJF000000000	SAMN37032563	23MDARD142	Listeria innocua
GCA_029348415.1	ABLEBO000000000	SAMN33566044	22MDARD0147	Listeria innocua
GCA_029348315.1	ABLEBP000000000	SAMN33566047	22MDARD0150	Listeria innocua
GCA_029344425.1	ABLDXY000000000	SAMN33566036	22MDARD0138	Listeria innocua
GCA_029342445.1	ABLDWN000000000	SAMN33566035	22MDARD0137	Listeria innocua
GCA_029379465.1	ABLEJM000000000	SAMN33566067	22MDARD0170	Listeria innocua
GCA_029379435.1	ABLEJL000000000	SAMN33566062	22MDARD0165	Listeria innocua
GCA_029365805.1	ABLEDW000000000	SAMN33566037	22MDARD0139	Listeria innocua
GCA_029365785.1	ABLEDX000000000	SAMN33566026	22MDARD0128	Listeria innocua
GCA_029365765.1	ABLEDU000000000	SAMN33566024	22MDARD0126	Listeria innocua
GCA_029365745.1	ABLEDV000000000	SAMN33566025	22MDARD0127	Listeria innocua
GCA_029372005.1	ABLEFS000000000	SAMN33566046	22MDARD0149	Listeria innocua
GCA_029373345.1	ABLDWI000000000	SAMN33566045	22MDARD0148	Listeria innocua
GCA_029410115.1	ABLEZU000000000	SAMN33566063	22MDARD0166	Listeria innocua
GCA_029410175.1	ABLEZV000000000	SAMN33566064	22MDARD0167	Listeria innocua
GCA_029410195.1	ABLEZW000000000	SAMN33566065	22MDARD0168	Listeria innocua
GCA_029410155.1	ABLEZX000000000	SAMN33566066	22MDARD0169	Listeria innocua
GCA_029169895.1	ABKYZI000000000	SAMN33566011	22MDARD0110	Listeria innocua
GCA_029169835.1	ABKYZB000000000	SAMN33566059	22MDARD0162	Listeria innocua
GCA_029169875.1	ABKYZH000000000	SAMN33566061	22MDARD0164	Listeria innocua
GCA_029169855.1	ABKYZG000000000	SAMN33566010	22MDARD0109	Listeria innocua
GCA_029169815.1	ABKYZE000000000	SAMN33566060	22MDARD0163	Listeria innocua
GCA_029169795.1	ABKYZC000000000	SAMN33566058	22MDARD0161	Listeria innocua
GCA_029169775.1	ABKYZF000000000	SAMN33566056	22MDARD0159	Listeria innocua
GCA_029169755.1	ABKYZD000000000	SAMN33566005	22MDARD0104	Listeria innocua
GCA_029169735.1	ABKYYZ000000000	SAMN33566054	22MDARD0157	Listeria innocua
GCA_029169675.1	ABKYYU000000000	SAMN33566052	22MDARD0155	Listeria innocua
GCA_029169715.1	ABKYYW000000000	SAMN33566053	22MDARD0156	Listeria innocua
GCA_029169695.1	ABKYZA000000000	SAMN33566055	22MDARD0158	Listeria innocua
GCA_029169655.1	ABKYYT000000000	SAMN33566050	22MDARD0153	Listeria innocua
GCA_029169615.1	ABKYYY000000000	SAMN33566048	22MDARD0151	Listeria innocua
GCA_029169635.1	ABKYYX000000000	SAMN33566051	22MDARD0154	Listeria innocua
GCA_029169595.1	ABKYYV000000000	SAMN33566049	22MDARD0152	Listeria innocua
GCA_029169575.1	ABKYYQ000000000	SAMN33566023	22MDARD0124	Listeria innocua
GCA_029169535.1	ABKYYS000000000	SAMN33566022	22MDARD0123	Listeria innocua
GCA_029169555.1	ABKYYM000000000	SAMN33566021	22MDARD0122	Listeria innocua
GCA_029169515.1	ABKYYL000000000	SAMN33566019	22MDARD0120	Listeria innocua
GCA_029169495.1	ABKYYO000000000	SAMN33566018	22MDARD0119	Listeria innocua
GCA_029169475.1	ABKYYP000000000	SAMN33566003	22MDARD0102	Listeria innocua
GCA_029169455.1	ABKYYR000000000	SAMN33566020	22MDARD0121	Listeria innocua
GCA_029169435.1	ABKYYN000000000	SAMN33566004	22MDARD0103	Listeria innocua
GCA_040161185.1	ABSWZS000000000	SAMN41789389	24MDARD169	Listeria monocytogenes
GCA_040161105.1	ABSWZU000000000	SAMN41789391	24MDARD171	Listeria monocytogenes
GCA_040161085.1	ABSWZP000000000	SAMN41789385	24MDARD165	Listeria monocytogenes
GCA_040161045.1	ABSWZO000000000	SAMN41789386	24MDARD166	Listeria monocytogenes
GCA_040160945.1	ABSWZI000000000	SAMN41789382	24MDARD162	Listeria monocytogenes
GCA_040161445.1	ABSXAJ000000000	SAMN41789381	24MDARD161	Listeria monocytogenes
GCA_040161425.1	ABSXAI000000000	SAMN41789380	24MDARD160	Listeria monocytogenes
GCA_040161405.1	ABSXAG000000000	SAMN41789378	24MDARD158	Listeria monocytogenes
GCA_040161385.1	ABSXAH000000000	SAMN41789379	24MDARD159	Listeria monocytogenes
GCA_040161365.1	ABSXAE000000000	SAMN41789377	24MDARD157	Listeria monocytogenes
GCA_040161345.1	ABSXAB000000000	SAMN41789397	24MDARD177	Listeria monocytogenes
GCA_040161325.1	ABSXAD000000000	SAMN41789375	24MDARD155	Listeria monocytogenes
GCA_040161305.1	ABSXAC000000000	SAMN41789398	24MDARD178	Listeria monocytogenes
GCA_040161285.1	ABSXAF000000000	SAMN41789376	24MDARD156	Listeria monocytogenes
GCA_040161265.1	ABSWZZ000000000	SAMN41789396	24MDARD176	Listeria monocytogenes
GCA_040161245.1	ABSWZW000000000	SAMN41789394	24MDARD174	Listeria monocytogenes
GCA_040161225.1	ABSXAA000000000	SAMN41789395	24MDARD175	Listeria monocytogenes
GCA_040161205.1	ABSWZY000000000	SAMN41789393	24MDARD173	Listeria monocytogenes
GCA_040161165.1	ABSWZV000000000	SAMN41789374	24MDARD154	Listeria monocytogenes
GCA_040161145.1	ABSWZX000000000	SAMN41789392	24MDARD172	Listeria monocytogenes
GCA_040161125.1	ABSWZT000000000	SAMN41789390	24MDARD170	Listeria monocytogenes
GCA_040161065.1	ABSWZN000000000	SAMN41789384	24MDARD164	Listeria monocytogenes
GCA_040161025.1	ABSWZQ000000000	SAMN41789387	24MDARD167	Listeria monocytogenes
GCA_040161005.1	ABSWZR000000000	SAMN41789388	24MDARD168	Listeria monocytogenes
GCA_040160985.1	ABSWZG000000000	SAMN41789383	24MDARD163	Listeria monocytogenes
GCA_040160955.1	ABSWZH000000000	SAMN41789373	24MDARD153	Listeria monocytogenes
GCA_040160855.1	ABSWZF000000000	SAMN41789372	24MDARD152	Listeria monocytogenes
GCA_039581185.1	ABSCOT000000000	SAMN41249464	24MDARD039	Listeria monocytogenes
GCA_039583245.1	ABSCRQ000000000	SAMN41249465	24MDARD040	Listeria monocytogenes
GCA_008595385.1	AAKKUU000000000	SAMN08163920	17FMFA000659	Listeria monocytogenes
GCA_004725245.1	AABEAC000000000	SAMN06899309	12FMFO000356	Listeria monocytogenes
GCA_004725205.1	AABEAF000000000	SAMN06899310	12FMFO000326	Listeria monocytogenes
GCA_004725185.1	AABEAL000000000	SAMN06899338	12FMEN000617	Listeria monocytogenes

SRA Data Details

Parameter	Value
Data volume, Gbases	160
Data volume, Mbytes	95597

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Listeria monocytogenes

GenomeTrakr Project: Michigan Department of Agriculture and Rural Development Geagley Laboratory

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