human gut metagenome (ID 844601) - BioProject

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Accession: PRJDB13556 ID: 844601

human gut metagenome

Recovery of the MAGs from the Japanese gut metagenome

We recovered metagenome assembled genomes (MAGs) from the 787 Japanese gut metagenome shotgun sequencing data. More...

Accession	PRJDB13556
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	human gut metagenome[Taxonomy ID: 408170] unclassified sequences; metagenomes; organismal metagenomes; human gut metagenome
Submission	Registration date: 1-Jun-2022 Department of Statistical Genetics, Osaka University Graduate School of Medicine

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5351
WGS master	60
SRA Experiments	5
Other datasets
BioSample	19085
Assembly	55

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

54
54

Assembly	WGS	BioSample	Taxonomy
GCA_023708745.1	BREL00000000	SAMD00475021	Acidaminococcus intestini
GCA_023708485.1	BRDY00000000	SAMD00485042	Acidaminococcus intestini
GCA_023708325.1	BRDQ00000000	SAMD00483655	Acidaminococcus intestini
GCA_023708245.1	BRDM00000000	SAMD00483065	Acidaminococcus intestini
GCA_023708165.1	BRDI00000000	SAMD00482719	Acidaminococcus intestini
GCA_023708105.1	BRDF00000000	SAMD00480831	Acidaminococcus intestini
GCA_023708125.1	BRDG00000000	SAMD00481147	Acinetobacter sp.
GCA_023708645.1	BREG00000000	SAMD00473538	Acinetobacter sp.
GCA_023709125.1	BRFE00000000	SAMD00478984	Akkermansia muciniphila
GCA_023708265.1	BRDN00000000	SAMD00483387	Alistipes inops
GCA_023708205.1	BRDK00000000	SAMD00482813	Alistipes inops
GCA_023708385.1	BRDT00000000	SAMD00484423	Alistipes inops
GCA_023708305.1	BRDP00000000	SAMD00483561	Alistipes inops
GCA_023708085.1	BRDE00000000	SAMD00480770	Alistipes onderdonkii
GCA_023708905.1	BRET00000000	SAMD00476473	Alistipes onderdonkii
GCA_023708185.1	BRDJ00000000	SAMD00482751	Alistipes putredinis
GCA_023708565.1	BREC00000000	SAMD00485970	Bacillota bacterium
GCA_023708705.1	BREJ00000000	SAMD00474192	Bacillota bacterium
GCA_023708685.1	BREI00000000	SAMD00474068	Bacteroides uniformis
GCA_023708545.1	BREB00000000	SAMD00471741	Bacteroides uniformis
GCA_023709045.1	BRFA00000000	SAMD00477470	Bacteroides uniformis
GCA_023708585.1	BRED00000000	SAMD00486453	Bifidobacterium adolescentis
GCA_023708445.1	BRDW00000000	SAMD00484893	Bifidobacterium adolescentis
GCA_023708665.1	BREH00000000	SAMD00473793	Candidatus Methanomassiliicoccus intestinalis
GCA_023708865.1	BRER00000000	SAMD00475792	Clostridium fessum
GCA_023709005.1	BREY00000000	SAMD00477167	Collinsella sp.
GCA_023708985.1	BREX00000000	SAMD00477095	Collinsella sp.
GCA_023708885.1	BRES00000000	SAMD00476210	Dialister sp.
GCA_023708945.1	BREV00000000	SAMD00476622	Escherichia coli
GCA_023709085.1	BRFC00000000	SAMD00478595	Escherichia coli
GCA_023708805.1	BREO00000000	SAMD00475392	Escherichia coli
GCA_023708225.1	BRDL00000000	SAMD00483031	Escherichia coli
GCA_023709105.1	BRFD00000000	SAMD00478909	Faecalibacterium duncaniae
GCA_023708925.1	BREU00000000	SAMD00476531	Faecalibacterium prausnitzii
GCA_023708965.1	BREW00000000	SAMD00476893	Faecalibacterium prausnitzii
GCA_023708785.1	BREN00000000	SAMD00475328	Faecalibacterium prausnitzii
GCA_023708765.1	BREM00000000	SAMD00475136	Faecalibacterium prausnitzii
GCA_023708525.1	BREA00000000	SAMD00485667	Faecalibacterium prausnitzii
GCA_023708365.1	BRDS00000000	SAMD00484381	Faecalibacterium prausnitzii
GCA_023708345.1	BRDR00000000	SAMD00484053	Faecalibacterium prausnitzii
GCA_023708725.1	BREK00000000	SAMD00474499	Fusicatenibacter saccharivorans
GCA_023708605.1	BREE00000000	SAMD00472444	Hungatella effluvii
GCA_023708285.1	BRDO00000000	SAMD00471495	Leyella stercorea
GCA_023708625.1	BREF00000000	SAMD00473244	Opitutales bacterium
GCA_023708425.1	BRDV00000000	SAMD00484862	Parasutterella excrementihominis
GCA_023708405.1	BRDU00000000	SAMD00484449	Parasutterella excrementihominis
GCA_023708145.1	BRDH00000000	SAMD00482002	Parasutterella excrementihominis
GCA_023708505.1	BRDZ00000000	SAMD00471708	Porphyromonadaceae bacterium
GCA_023709145.1	BRFF00000000	SAMD00480122	Ruminococcus sp.
GCA_023708465.1	BRDX00000000	SAMD00484983	Segatella copri
GCA_023709065.1	BRFB00000000	SAMD00478065	bacterium
GCA_023709025.1	BREZ00000000	SAMD00477176	bacterium
GCA_023708845.1	BREQ00000000	SAMD00470707	bacterium
GCA_023708825.1	BREP00000000	SAMD00475511	bacterium

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human gut metagenome

Recovery of the MAGs from the Japanese gut metagenome

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